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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.7
nTPM
Monaco:
245.9
nTPM
Schmiedel:
40.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.7
HPA sample
nTPM
gdT-cell nTPM: 34.7
Samples: 6
Max nTPM: 49.6
Min nTPM: 19.9
P10809_1007
25.9
P10809_1022
49.6
P10809_1041
19.9
P10809_1060
43.2
P10809_1077
36.9
P10809_1098
32.6
MAIT T-cell nTPM: 8.3
Samples: 6
Max nTPM: 14.4
Min nTPM: 2.2
P10809_1006
9.0
P10809_1024
5.8
P10809_1043
2.2
P10809_1062
12.1
P10809_1083
6.0
P10809_1097
14.4
Memory CD4 T-cell nTPM: 12.3
Samples: 6
Max nTPM: 24.3
Min nTPM: 5.0
P10809_1014
7.5
P10809_1026
5.0
P10809_1045
5.9
P10809_1064
24.3
P10809_1086
23.8
P10809_1113
7.0
Memory CD8 T-cell nTPM: 29.7
Samples: 5
Max nTPM: 42.1
Min nTPM: 18.9
P10809_1012
26.4
P10809_1027
29.9
P10809_1046
31.1
P10809_1065
42.1
P10809_1111
18.9
Naive CD4 T-cell nTPM: 2.6
Samples: 6
Max nTPM: 11.9
Min nTPM: 0.0
P10809_1015
0.7
P10809_1030
2.0
P10809_1049
0.0
P10809_1068
1.0
P10809_1085
11.9
P10809_1112
0.0
Naive CD8 T-cell nTPM: 18.1
Samples: 6
Max nTPM: 38.5
Min nTPM: 1.6
P10809_1016
1.6
P10809_1031
11.8
P10809_1050
18.3
P10809_1069
29.2
P10809_1087
38.5
P10809_1110
8.9
T-reg nTPM: 0.0
Samples: 6
Max nTPM: 0.0
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
0.0
P10809_1094
0.0
P10809_1106
0.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
245.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 40.8
Samples: 4
Max nTPM: 59.3
Min nTPM: 22.7
RHH5202_R3573
33.9
RHH5230_R3602
22.7
RHH5259_R3631
59.3
RHH5288_R3660
47.4
Effector memory CD8 T-cell nTPM: 178.2
Samples: 4
Max nTPM: 189.8
Min nTPM: 154.3
RHH5203_R3574
189.8
RHH5231_R3603
179.4
RHH5260_R3632
154.3
RHH5289_R3661
189.4
MAIT T-cell nTPM: 35.1
Samples: 4
Max nTPM: 37.7
Min nTPM: 29.0
RHH5233_R3605
36.4
RHH5205_R3576
37.7
RHH5262_R3634
29.0
RHH5297_R3663
37.4
Memory CD4 T-cell TFH nTPM: 15.1
Samples: 4
Max nTPM: 23.4
Min nTPM: 6.9
RHH5300_R3666
11.3
RHH5236_R3608
6.9
RHH5265_R3637
18.9
RHH5208_R3579
23.4
Memory CD4 T-cell Th1 nTPM: 61.6
Samples: 4
Max nTPM: 91.8
Min nTPM: 38.9
RHH5210_R3581
38.9
RHH5302_R3668
41.7
RHH5238_R3610
91.8
RHH5267_R3639
73.8
Memory CD4 T-cell Th1/Th17 nTPM: 39.9
Samples: 4
Max nTPM: 48.0
Min nTPM: 27.7
RHH5303_R3669
41.8
RHH5211_R3582
27.7
RHH5239_R3611
42.2
RHH5268_R3640
48.0
Memory CD4 T-cell Th17 nTPM: 32.4
Samples: 4
Max nTPM: 42.2
Min nTPM: 17.9
RHH5304_R3670
34.2
RHH5212_R3583
17.9
RHH5240_R3612
35.1
RHH5269_R3641
42.2
Memory CD4 T-cell Th2 nTPM: 55.6
Samples: 4
Max nTPM: 69.4
Min nTPM: 43.7
RHH5305_R3671
53.3
RHH5213_R3584
43.7
RHH5241_R3613
69.4
RHH5270_R3642
56.0
Naive CD4 T-cell nTPM: 3.4
Samples: 4
Max nTPM: 10.1
Min nTPM: 0.0
RHH5306_R3672
0.9
RHH5214_R3585
2.5
RHH5242_R3614
10.1
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 1.0
Samples: 4
Max nTPM: 2.6
Min nTPM: 0.0
RHH5201_R3572
0.4
RHH5229_R3601
0.8
RHH5258_R3630
2.6
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 184.6
Samples: 4
Max nTPM: 232.9
Min nTPM: 140.2
RHH5235_R3607
195.2
RHH5264_R3636
170.1
RHH5207_R3578
232.9
RHH5299_R3665
140.2
T-reg nTPM: 16.4
Samples: 4
Max nTPM: 20.8
Min nTPM: 10.9
RHH5301_R3667
13.8
RHH5237_R3609
20.1
RHH5266_R3638
20.8
RHH5209_R3580
10.9
Terminal effector memory CD4 T-cell nTPM: 245.9
Samples: 2
Max nTPM: 292.6
Min nTPM: 199.2
RHH5243_R3615
292.6
RHH5272_R3644
199.2
Terminal effector memory CD8 T-cell nTPM: 194.6
Samples: 4
Max nTPM: 217.0
Min nTPM: 179.8
RHH5232_R3604
198.1
RHH5204_R3575
217.0
RHH5261_R3633
183.6
RHH5296_R3662
179.8
Vd2 gdTCR nTPM: 75.4
Samples: 4
Max nTPM: 101.8
Min nTPM: 59.8
RHH5234_R3606
64.2
RHH5206_R3577
101.8
RHH5263_R3635
75.9
RHH5298_R3664
59.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
