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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
261.6
nTPM
FANTOM5:
125.5
Scaled Tags Per Million
Pig:
36.9
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
261.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 225.3
2090
Male, age 80, both hemispheres
250.7
2188
Female, age 91, both hemispheres
240.9
2301
Female, age 85, both hemispheres
216.4
1984
Male, age 76, both hemispheres
193.2
Dorsal cochlear nucleus nTPM: 236.0
2802
Male, age 74, right hemisphere
251.1
2187
Female, age 91, both hemispheres
246.8
2370
Male, age 61, both hemispheres
246.3
2058
Male, age 76, both hemispheres
220.0
2378
Male, age 80, both hemispheres
216.0
Dorsal tegmental nucleus nTPM: 232.4
2083
Male, age 80, both hemispheres
259.3
2358
Male, age 61, both hemispheres
245.1
2326
Male, age 74, both hemispheres
219.6
1936
Male, age 76, left hemisphere
205.5
Dorsolateral tegmental area nTPM: 242.8
2337
Male, age 61, both hemispheres
303.1
2654
Male, age 80, both hemispheres
258.2
2751
Female, age 85, both hemispheres
239.5
2141
Male, age 76, both hemispheres
206.7
2360
Male, age 74, both hemispheres
206.6
Kolliker-Fuse nucleus nTPM: 252.3
2793
Female, age 91, left hemisphere
275.5
2163
Male, age 80, both hemispheres
251.1
2315
Male, age 76, right hemisphere
230.4
Lateral lemniscal nuclei nTPM: 211.4
2036
Male, age 80, both hemispheres
256.0
2746
Female, age 85, left hemisphere
217.0
2169
Male, age 76, both hemispheres
212.3
2320
Female, age 91, left hemisphere
198.6
2453
Male, age 74, right hemisphere
173.2
Lateral parabrachial nucleus nTPM: 261.6
2792
Male, age 76, both hemispheres
305.0
2790
Male, age 61, both hemispheres
250.1
2013
Male, age 80, both hemispheres
248.8
2139
Female, age 85, right hemisphere
242.5
Lateral vestibular nucleus nTPM: 228.7
2311
Male, age 80, both hemispheres
235.1
2184
Male, age 76, both hemispheres
222.3
Locus coeruleus nTPM: 209.0
2123
Female, age 91, both hemispheres
237.7
2720
Male, age 74, both hemispheres
231.2
2162
Male, age 80, both hemispheres
210.8
2014
Male, age 55, unknown
208.6
2317
Female, age 72, unknown
203.0
1980
Male, age 76, both hemispheres
191.1
2788
Male, age 74, unknown
180.7
Medial parabrachial nucleus nTPM: 235.6
2854
Male, age 80, both hemispheres
267.2
2170
Female, age 91, both hemispheres
265.3
2156
Male, age 61, both hemispheres
221.8
2463
Female, age 85, right hemisphere
219.8
2786
Male, age 76, both hemispheres
203.7
Medial periolivary nuclei nTPM: 221.2
2063
Male, age 76, both hemispheres
237.0
2791
Male, age 74, right hemisphere
231.3
2081
Male, age 80, both hemispheres
225.9
2171
Female, age 85, both hemispheres
208.6
2458
Female, age 91, both hemispheres
203.2
Motor facial nucleus nTPM: 220.9
2697
Female, age 85, both hemispheres
243.6
2062
Male, age 76, both hemispheres
233.3
2126
Male, age 61, both hemispheres
230.7
2365
Male, age 74, right hemisphere
228.6
2795
Female, age 91, both hemispheres
215.5
2327
Male, age 80, both hemispheres
173.5
Motor trigeminal nucleus nTPM: 218.4
2335
Male, age 61, both hemispheres
232.0
2079
Male, age 80, both hemispheres
225.2
2560
Male, age 74, both hemispheres
221.8
2309
Male, age 76, both hemispheres
219.2
2321
Female, age 91, both hemispheres
193.9
Nuclei of the trapezoid body nTPM: 221.3
1983
Male, age 76, both hemispheres
264.5
2159
Male, age 61, both hemispheres
231.1
2166
Male, age 80, both hemispheres
211.5
2735
Female, age 85, both hemispheres
209.3
2368
Female, age 91, both hemispheres
190.0
Nucleus raphe magnus nTPM: 214.0
2051
Male, age 76, both hemispheres
243.3
2160
Male, age 61, both hemispheres
241.6
2455
Male, age 74, both hemispheres
212.3
2172
Female, age 85, both hemispheres
205.9
2459
Female, age 91, both hemispheres
194.9
2328
Male, age 80, both hemispheres
186.0
Paramedian reticular nucleus nTPM: 228.0
2050
Female, age 85, both hemispheres
264.4
2057
Male, age 80, both hemispheres
227.4
2313
Male, age 61, both hemispheres
215.4
2052
Male, age 76, both hemispheres
205.0
Pedunculopontine tegmental nucleus nTPM: 238.4
2338
Male, age 61, both hemispheres
277.2
2334
Male, age 80, both hemispheres
230.4
1921
Female, age 85, both hemispheres
207.6
Pontine nuclei nTPM: 232.4
1863
Male, age 55, unknown
257.2
2787
Female, age 85, both hemispheres
247.3
2727
Male, age 61, right hemisphere
245.5
2319
Female, age 91, both hemispheres
234.2
2109
Female, age 72, unknown
223.7
1968
Male, age 76, left hemisphere
222.9
2115
Male, age 80, left hemisphere
214.4
2454
Male, age 74, left hemisphere
214.0
Pontine raphe nucleus nTPM: 228.5
2122
Female, age 85, midline
228.9
2853
Male, age 76, midline
228.2
Posteroventral cochlear nucleus nTPM: 244.7
2135
Female, age 91, both hemispheres
273.2
2341
Male, age 80, both hemispheres
257.3
2371
Male, age 61, both hemispheres
249.4
2752
Female, age 85, both hemispheres
223.1
2070
Male, age 76, both hemispheres
220.5
Principal sensory trigeminal nucleus nTPM: 222.0
2158
Male, age 61, both hemispheres
251.8
2367
Female, age 91, left hemisphere
224.0
2324
Male, age 76, both hemispheres
209.6
2008
Male, age 80, left hemisphere
202.6
Reticular pontine nucleus, caudal nTPM: 216.6
2092
Male, age 76, both hemispheres
244.1
2559
Male, age 74, both hemispheres
240.6
2457
Female, age 91, both hemispheres
206.9
2332
Male, age 80, right hemisphere
174.7
Reticular pontine nucleus, oral nTPM: 219.1
1939
Male, age 80, both hemispheres
246.0
2167
Male, age 76, both hemispheres
227.7
2012
Female, age 85, both hemispheres
223.2
2366
Female, age 91, both hemispheres
220.6
2361
Male, age 74, both hemispheres
178.2
Reticulotegmental nucleus nTPM: 215.9
2452
Male, age 74, both hemispheres
225.7
2325
Male, age 76, both hemispheres
216.1
2333
Male, age 80, both hemispheres
211.2
2322
Female, age 91, both hemispheres
210.5
Spinal trigeminal nucleus, oral nTPM: 209.9
2164
Male, age 80, both hemispheres
215.2
2737
Female, age 85, both hemispheres
208.7
1978
Male, age 76, both hemispheres
205.8
Subcoeruleus area nTPM: 216.7
2369
Female, age 85, left hemisphere
249.9
2451
Male, age 74, both hemispheres
228.4
1958
Male, age 80, both hemispheres
220.4
2089
Male, age 76, left hemisphere
193.7
2323
Female, age 91, left hemisphere
191.3
Superior olive nTPM: 220.2
2020
Male, age 76, both hemispheres
245.2
2364
Male, age 74, right hemisphere
224.3
2561
Female, age 91, both hemispheres
221.8
1875
Female, age 85, both hemispheres
221.5
2329
Male, age 80, right hemisphere
188.1
Ventral periolivary nuclei nTPM: 225.0
2023
Male, age 76, both hemispheres
259.0
2165
Male, age 80, both hemispheres
221.9
2794
Female, age 91, left hemisphere
210.3
2130
Female, age 85, both hemispheres
208.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 212.6
2359
Male, age 61, both hemispheres
235.8
2840
Female, age 85, both hemispheres
227.2
1959
Male, age 76, both hemispheres
214.5
2161
Male, age 80, both hemispheres
208.3
2456
Female, age 91, both hemispheres
202.0
2449
Male, age 74, both hemispheres
187.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.