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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
324.0
nTPM
Monaco:
271.8
nTPM
Schmiedel:
60.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
324.0
HPA sample
nTPM
gdT-cell nTPM: 324.0
Samples: 6
Max nTPM: 470.4
Min nTPM: 241.7
P10809_1007
282.3
P10809_1022
297.3
P10809_1041
470.4
P10809_1060
241.7
P10809_1077
409.1
P10809_1098
243.2
MAIT T-cell nTPM: 235.7
Samples: 6
Max nTPM: 276.5
Min nTPM: 195.7
P10809_1006
195.7
P10809_1024
245.6
P10809_1043
276.5
P10809_1062
221.2
P10809_1083
236.4
P10809_1097
238.5
Memory CD4 T-cell nTPM: 127.3
Samples: 6
Max nTPM: 167.7
Min nTPM: 96.6
P10809_1014
96.6
P10809_1026
120.3
P10809_1045
165.3
P10809_1064
105.4
P10809_1086
167.7
P10809_1113
108.2
Memory CD8 T-cell nTPM: 260.0
Samples: 5
Max nTPM: 341.7
Min nTPM: 160.1
P10809_1012
160.1
P10809_1027
324.0
P10809_1046
341.7
P10809_1065
262.8
P10809_1111
211.6
Naive CD4 T-cell nTPM: 56.1
Samples: 6
Max nTPM: 83.1
Min nTPM: 38.9
P10809_1015
38.9
P10809_1030
83.1
P10809_1049
60.3
P10809_1068
39.1
P10809_1085
69.3
P10809_1112
45.6
Naive CD8 T-cell nTPM: 186.5
Samples: 6
Max nTPM: 299.4
Min nTPM: 81.2
P10809_1016
81.2
P10809_1031
151.8
P10809_1050
245.5
P10809_1069
236.3
P10809_1087
299.4
P10809_1110
104.5
T-reg nTPM: 122.0
Samples: 6
Max nTPM: 205.7
Min nTPM: 84.8
P10809_1018
84.8
P10809_1037
110.0
P10809_1056
205.7
P10809_1075
92.3
P10809_1094
120.7
P10809_1106
118.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
271.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 61.9
Samples: 4
Max nTPM: 97.6
Min nTPM: 31.5
RHH5202_R3573
54.3
RHH5230_R3602
31.5
RHH5259_R3631
64.2
RHH5288_R3660
97.6
Effector memory CD8 T-cell nTPM: 92.9
Samples: 4
Max nTPM: 124.4
Min nTPM: 68.3
RHH5203_R3574
74.8
RHH5231_R3603
124.4
RHH5260_R3632
68.3
RHH5289_R3661
104.2
MAIT T-cell nTPM: 93.5
Samples: 4
Max nTPM: 148.4
Min nTPM: 46.7
RHH5233_R3605
74.7
RHH5205_R3576
46.7
RHH5262_R3634
104.3
RHH5297_R3663
148.4
Memory CD4 T-cell TFH nTPM: 36.2
Samples: 4
Max nTPM: 78.2
Min nTPM: 16.8
RHH5300_R3666
31.1
RHH5236_R3608
78.2
RHH5265_R3637
18.5
RHH5208_R3579
16.8
Memory CD4 T-cell Th1 nTPM: 56.7
Samples: 4
Max nTPM: 90.4
Min nTPM: 31.4
RHH5210_R3581
31.4
RHH5302_R3668
90.4
RHH5238_R3610
60.5
RHH5267_R3639
44.3
Memory CD4 T-cell Th1/Th17 nTPM: 71.2
Samples: 4
Max nTPM: 113.2
Min nTPM: 36.0
RHH5303_R3669
113.2
RHH5211_R3582
86.8
RHH5239_R3611
36.0
RHH5268_R3640
48.8
Memory CD4 T-cell Th17 nTPM: 56.5
Samples: 4
Max nTPM: 66.1
Min nTPM: 44.2
RHH5304_R3670
66.1
RHH5212_R3583
58.8
RHH5240_R3612
56.9
RHH5269_R3641
44.2
Memory CD4 T-cell Th2 nTPM: 61.2
Samples: 4
Max nTPM: 74.0
Min nTPM: 42.6
RHH5305_R3671
68.8
RHH5213_R3584
42.6
RHH5241_R3613
74.0
RHH5270_R3642
59.3
Naive CD4 T-cell nTPM: 21.5
Samples: 4
Max nTPM: 34.7
Min nTPM: 7.8
RHH5306_R3672
24.8
RHH5214_R3585
34.7
RHH5242_R3614
7.8
RHH5271_R3643
18.6
Naive CD8 T-cell nTPM: 26.2
Samples: 4
Max nTPM: 33.0
Min nTPM: 19.1
RHH5201_R3572
19.1
RHH5229_R3601
33.0
RHH5258_R3630
32.4
RHH5287_R3659
20.4
Non-Vd2 gdTCR nTPM: 252.7
Samples: 4
Max nTPM: 471.4
Min nTPM: 138.7
RHH5235_R3607
138.7
RHH5264_R3636
228.0
RHH5207_R3578
172.5
RHH5299_R3665
471.4
T-reg nTPM: 45.4
Samples: 4
Max nTPM: 60.1
Min nTPM: 28.9
RHH5301_R3667
59.7
RHH5237_R3609
60.1
RHH5266_R3638
32.9
RHH5209_R3580
28.9
Terminal effector memory CD4 T-cell nTPM: 95.4
Samples: 2
Max nTPM: 96.5
Min nTPM: 94.2
RHH5243_R3615
96.5
RHH5272_R3644
94.2
Terminal effector memory CD8 T-cell nTPM: 271.8
Samples: 4
Max nTPM: 392.2
Min nTPM: 164.7
RHH5232_R3604
164.7
RHH5204_R3575
392.2
RHH5261_R3633
250.3
RHH5296_R3662
279.9
Vd2 gdTCR nTPM: 156.0
Samples: 4
Max nTPM: 229.8
Min nTPM: 81.9
RHH5234_R3606
112.6
RHH5206_R3577
229.8
RHH5263_R3635
81.9
RHH5298_R3664
199.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
