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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
176.5
nTPM
Monaco:
515.4
nTPM
Schmiedel:
399.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
176.5
HPA sample
nTPM
gdT-cell nTPM: 38.4
Samples: 6
Max nTPM: 47.5
Min nTPM: 24.9
P10809_1007
44.2
P10809_1022
41.1
P10809_1041
36.1
P10809_1060
47.5
P10809_1077
24.9
P10809_1098
36.8
MAIT T-cell nTPM: 43.6
Samples: 6
Max nTPM: 57.0
Min nTPM: 27.5
P10809_1006
52.2
P10809_1024
44.2
P10809_1043
57.0
P10809_1062
39.9
P10809_1083
27.5
P10809_1097
41.0
Memory CD4 T-cell nTPM: 126.5
Samples: 6
Max nTPM: 159.8
Min nTPM: 85.1
P10809_1014
147.7
P10809_1026
127.9
P10809_1045
159.8
P10809_1064
85.1
P10809_1086
91.8
P10809_1113
146.4
Memory CD8 T-cell nTPM: 57.5
Samples: 5
Max nTPM: 90.3
Min nTPM: 30.7
P10809_1012
90.3
P10809_1027
56.1
P10809_1046
53.2
P10809_1065
30.7
P10809_1111
57.3
Naive CD4 T-cell nTPM: 176.5
Samples: 6
Max nTPM: 245.3
Min nTPM: 111.5
P10809_1015
151.7
P10809_1030
216.2
P10809_1049
245.3
P10809_1068
170.4
P10809_1085
111.5
P10809_1112
163.7
Naive CD8 T-cell nTPM: 99.2
Samples: 6
Max nTPM: 142.7
Min nTPM: 42.8
P10809_1016
109.9
P10809_1031
142.7
P10809_1050
110.7
P10809_1069
90.2
P10809_1087
42.8
P10809_1110
99.0
T-reg nTPM: 92.9
Samples: 6
Max nTPM: 126.5
Min nTPM: 61.0
P10809_1018
97.2
P10809_1037
102.5
P10809_1056
126.5
P10809_1075
61.0
P10809_1094
76.6
P10809_1106
93.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
515.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 268.9
Samples: 4
Max nTPM: 299.9
Min nTPM: 250.0
RHH5202_R3573
256.0
RHH5230_R3602
299.9
RHH5259_R3631
250.0
RHH5288_R3660
269.8
Effector memory CD8 T-cell nTPM: 96.4
Samples: 4
Max nTPM: 111.5
Min nTPM: 76.1
RHH5203_R3574
99.8
RHH5231_R3603
98.1
RHH5260_R3632
76.1
RHH5289_R3661
111.5
MAIT T-cell nTPM: 72.2
Samples: 4
Max nTPM: 129.0
Min nTPM: 43.3
RHH5233_R3605
129.0
RHH5205_R3576
66.3
RHH5262_R3634
50.0
RHH5297_R3663
43.3
Memory CD4 T-cell TFH nTPM: 373.4
Samples: 4
Max nTPM: 461.1
Min nTPM: 319.2
RHH5300_R3666
319.2
RHH5236_R3608
461.1
RHH5265_R3637
338.6
RHH5208_R3579
374.6
Memory CD4 T-cell Th1 nTPM: 345.0
Samples: 4
Max nTPM: 415.8
Min nTPM: 276.1
RHH5210_R3581
386.9
RHH5302_R3668
276.1
RHH5238_R3610
415.8
RHH5267_R3639
301.3
Memory CD4 T-cell Th1/Th17 nTPM: 303.3
Samples: 4
Max nTPM: 463.8
Min nTPM: 232.1
RHH5303_R3669
232.1
RHH5211_R3582
282.7
RHH5239_R3611
463.8
RHH5268_R3640
234.7
Memory CD4 T-cell Th17 nTPM: 358.0
Samples: 4
Max nTPM: 527.5
Min nTPM: 280.4
RHH5304_R3670
327.6
RHH5212_R3583
296.3
RHH5240_R3612
527.5
RHH5269_R3641
280.4
Memory CD4 T-cell Th2 nTPM: 515.4
Samples: 4
Max nTPM: 736.0
Min nTPM: 404.7
RHH5305_R3671
404.7
RHH5213_R3584
500.5
RHH5241_R3613
736.0
RHH5270_R3642
420.5
Naive CD4 T-cell nTPM: 413.5
Samples: 4
Max nTPM: 574.1
Min nTPM: 332.5
RHH5306_R3672
368.0
RHH5214_R3585
379.4
RHH5242_R3614
574.1
RHH5271_R3643
332.5
Naive CD8 T-cell nTPM: 357.6
Samples: 4
Max nTPM: 448.0
Min nTPM: 303.0
RHH5201_R3572
371.0
RHH5229_R3601
448.0
RHH5258_R3630
303.0
RHH5287_R3659
308.2
Non-Vd2 gdTCR nTPM: 91.8
Samples: 4
Max nTPM: 123.6
Min nTPM: 78.8
RHH5235_R3607
123.6
RHH5264_R3636
81.1
RHH5207_R3578
78.8
RHH5299_R3665
83.6
T-reg nTPM: 286.8
Samples: 4
Max nTPM: 528.3
Min nTPM: 194.3
RHH5301_R3667
210.9
RHH5237_R3609
528.3
RHH5266_R3638
194.3
RHH5209_R3580
213.7
Terminal effector memory CD4 T-cell nTPM: 86.2
Samples: 2
Max nTPM: 90.9
Min nTPM: 81.4
RHH5243_R3615
81.4
RHH5272_R3644
90.9
Terminal effector memory CD8 T-cell nTPM: 59.2
Samples: 4
Max nTPM: 90.2
Min nTPM: 41.4
RHH5232_R3604
90.2
RHH5204_R3575
46.3
RHH5261_R3633
41.4
RHH5296_R3662
58.8
Vd2 gdTCR nTPM: 83.4
Samples: 4
Max nTPM: 125.2
Min nTPM: 47.9
RHH5234_R3606
125.2
RHH5206_R3577
47.9
RHH5263_R3635
79.3
RHH5298_R3664
81.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
