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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
323.7
nTPM
Monaco:
55.3
nTPM
Schmiedel:
36.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
323.7
HPA sample
nTPM
gdT-cell nTPM: 242.0
Samples: 6
Max nTPM: 327.0
Min nTPM: 173.9
P10809_1007
173.9
P10809_1022
238.9
P10809_1041
327.0
P10809_1060
234.3
P10809_1077
256.4
P10809_1098
221.7
MAIT T-cell nTPM: 164.5
Samples: 6
Max nTPM: 195.2
Min nTPM: 97.8
P10809_1006
97.8
P10809_1024
169.7
P10809_1043
195.2
P10809_1062
167.7
P10809_1083
170.8
P10809_1097
185.8
Memory CD4 T-cell nTPM: 228.3
Samples: 6
Max nTPM: 287.3
Min nTPM: 131.9
P10809_1014
131.9
P10809_1026
287.3
P10809_1045
220.3
P10809_1064
255.7
P10809_1086
244.4
P10809_1113
230.2
Memory CD8 T-cell nTPM: 243.0
Samples: 5
Max nTPM: 293.6
Min nTPM: 153.5
P10809_1012
153.5
P10809_1027
293.6
P10809_1046
245.3
P10809_1065
289.3
P10809_1111
233.4
Naive CD4 T-cell nTPM: 163.4
Samples: 6
Max nTPM: 220.3
Min nTPM: 89.3
P10809_1015
89.3
P10809_1030
180.0
P10809_1049
220.3
P10809_1068
162.2
P10809_1085
172.1
P10809_1112
156.7
Naive CD8 T-cell nTPM: 204.5
Samples: 6
Max nTPM: 276.6
Min nTPM: 98.8
P10809_1016
98.8
P10809_1031
235.7
P10809_1050
198.5
P10809_1069
274.4
P10809_1087
276.6
P10809_1110
143.1
T-reg nTPM: 323.8
Samples: 6
Max nTPM: 451.0
Min nTPM: 206.5
P10809_1018
206.5
P10809_1037
374.9
P10809_1056
451.0
P10809_1075
305.0
P10809_1094
329.2
P10809_1106
275.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.8
Samples: 4
Max nTPM: 39.9
Min nTPM: 24.1
RHH5202_R3573
26.6
RHH5230_R3602
24.1
RHH5259_R3631
36.6
RHH5288_R3660
39.9
Effector memory CD8 T-cell nTPM: 23.6
Samples: 4
Max nTPM: 37.3
Min nTPM: 17.1
RHH5203_R3574
17.1
RHH5231_R3603
18.9
RHH5260_R3632
37.3
RHH5289_R3661
20.9
MAIT T-cell nTPM: 20.6
Samples: 4
Max nTPM: 23.2
Min nTPM: 16.8
RHH5233_R3605
16.8
RHH5205_R3576
21.8
RHH5262_R3634
20.4
RHH5297_R3663
23.2
Memory CD4 T-cell TFH nTPM: 29.2
Samples: 4
Max nTPM: 47.5
Min nTPM: 10.6
RHH5300_R3666
31.1
RHH5236_R3608
47.5
RHH5265_R3637
27.5
RHH5208_R3579
10.6
Memory CD4 T-cell Th1 nTPM: 38.5
Samples: 4
Max nTPM: 52.0
Min nTPM: 27.1
RHH5210_R3581
27.1
RHH5302_R3668
40.1
RHH5238_R3610
52.0
RHH5267_R3639
34.8
Memory CD4 T-cell Th1/Th17 nTPM: 24.6
Samples: 4
Max nTPM: 31.4
Min nTPM: 15.5
RHH5303_R3669
31.4
RHH5211_R3582
15.5
RHH5239_R3611
27.6
RHH5268_R3640
23.9
Memory CD4 T-cell Th17 nTPM: 25.3
Samples: 4
Max nTPM: 29.0
Min nTPM: 15.2
RHH5304_R3670
28.4
RHH5212_R3583
28.7
RHH5240_R3612
29.0
RHH5269_R3641
15.2
Memory CD4 T-cell Th2 nTPM: 23.4
Samples: 4
Max nTPM: 30.2
Min nTPM: 13.9
RHH5305_R3671
30.2
RHH5213_R3584
13.9
RHH5241_R3613
24.6
RHH5270_R3642
24.9
Naive CD4 T-cell nTPM: 28.3
Samples: 4
Max nTPM: 40.9
Min nTPM: 15.2
RHH5306_R3672
34.2
RHH5214_R3585
40.9
RHH5242_R3614
15.2
RHH5271_R3643
22.9
Naive CD8 T-cell nTPM: 27.0
Samples: 4
Max nTPM: 33.1
Min nTPM: 21.5
RHH5201_R3572
33.1
RHH5229_R3601
27.1
RHH5258_R3630
21.5
RHH5287_R3659
26.4
Non-Vd2 gdTCR nTPM: 42.1
Samples: 4
Max nTPM: 60.5
Min nTPM: 24.7
RHH5235_R3607
42.4
RHH5264_R3636
24.7
RHH5207_R3578
40.6
RHH5299_R3665
60.5
T-reg nTPM: 28.9
Samples: 4
Max nTPM: 41.0
Min nTPM: 21.4
RHH5301_R3667
30.6
RHH5237_R3609
41.0
RHH5266_R3638
22.6
RHH5209_R3580
21.4
Terminal effector memory CD4 T-cell nTPM: 32.4
Samples: 2
Max nTPM: 39.5
Min nTPM: 25.3
RHH5243_R3615
39.5
RHH5272_R3644
25.3
Terminal effector memory CD8 T-cell nTPM: 55.3
Samples: 4
Max nTPM: 79.2
Min nTPM: 26.7
RHH5232_R3604
26.7
RHH5204_R3575
79.2
RHH5261_R3633
67.4
RHH5296_R3662
47.8
Vd2 gdTCR nTPM: 35.6
Samples: 4
Max nTPM: 60.1
Min nTPM: 24.0
RHH5234_R3606
24.0
RHH5206_R3577
60.1
RHH5263_R3635
30.4
RHH5298_R3664
27.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
