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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
74.8
nTPM
Monaco:
166.0
nTPM
Schmiedel:
125.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
74.8
HPA sample
nTPM
gdT-cell nTPM: 74.3
Samples: 6
Max nTPM: 91.3
Min nTPM: 61.9
P10809_1007
65.7
P10809_1022
91.3
P10809_1041
88.1
P10809_1060
67.5
P10809_1077
61.9
P10809_1098
71.2
MAIT T-cell nTPM: 69.9
Samples: 6
Max nTPM: 82.3
Min nTPM: 53.9
P10809_1006
81.3
P10809_1024
69.4
P10809_1043
82.3
P10809_1062
64.3
P10809_1083
53.9
P10809_1097
68.4
Memory CD4 T-cell nTPM: 62.3
Samples: 6
Max nTPM: 73.1
Min nTPM: 52.1
P10809_1014
52.1
P10809_1026
60.6
P10809_1045
73.1
P10809_1064
70.4
P10809_1086
63.5
P10809_1113
53.9
Memory CD8 T-cell nTPM: 66.1
Samples: 5
Max nTPM: 82.0
Min nTPM: 47.4
P10809_1012
68.6
P10809_1027
61.2
P10809_1046
82.0
P10809_1065
71.2
P10809_1111
47.4
Naive CD4 T-cell nTPM: 47.8
Samples: 6
Max nTPM: 58.2
Min nTPM: 36.2
P10809_1015
36.2
P10809_1030
55.5
P10809_1049
58.2
P10809_1068
42.4
P10809_1085
47.7
P10809_1112
46.6
Naive CD8 T-cell nTPM: 54.9
Samples: 6
Max nTPM: 70.2
Min nTPM: 41.1
P10809_1016
41.1
P10809_1031
57.9
P10809_1050
46.0
P10809_1069
70.2
P10809_1087
66.4
P10809_1110
48.0
T-reg nTPM: 74.8
Samples: 6
Max nTPM: 83.9
Min nTPM: 58.7
P10809_1018
73.2
P10809_1037
82.6
P10809_1056
58.7
P10809_1075
76.5
P10809_1094
83.9
P10809_1106
74.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
166.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 123.0
Samples: 4
Max nTPM: 140.4
Min nTPM: 97.3
RHH5202_R3573
116.5
RHH5230_R3602
137.9
RHH5259_R3631
140.4
RHH5288_R3660
97.3
Effector memory CD8 T-cell nTPM: 143.9
Samples: 4
Max nTPM: 166.4
Min nTPM: 133.0
RHH5203_R3574
166.4
RHH5231_R3603
133.0
RHH5260_R3632
134.6
RHH5289_R3661
141.5
MAIT T-cell nTPM: 131.5
Samples: 4
Max nTPM: 163.9
Min nTPM: 102.0
RHH5233_R3605
125.7
RHH5205_R3576
163.9
RHH5262_R3634
134.4
RHH5297_R3663
102.0
Memory CD4 T-cell TFH nTPM: 101.0
Samples: 4
Max nTPM: 132.2
Min nTPM: 79.0
RHH5300_R3666
79.0
RHH5236_R3608
132.2
RHH5265_R3637
94.4
RHH5208_R3579
98.5
Memory CD4 T-cell Th1 nTPM: 95.0
Samples: 4
Max nTPM: 107.2
Min nTPM: 87.7
RHH5210_R3581
92.4
RHH5302_R3668
87.7
RHH5238_R3610
107.2
RHH5267_R3639
92.7
Memory CD4 T-cell Th1/Th17 nTPM: 125.5
Samples: 4
Max nTPM: 137.4
Min nTPM: 103.6
RHH5303_R3669
132.3
RHH5211_R3582
128.8
RHH5239_R3611
137.4
RHH5268_R3640
103.6
Memory CD4 T-cell Th17 nTPM: 130.2
Samples: 4
Max nTPM: 172.5
Min nTPM: 104.1
RHH5304_R3670
131.4
RHH5212_R3583
112.8
RHH5240_R3612
172.5
RHH5269_R3641
104.1
Memory CD4 T-cell Th2 nTPM: 114.7
Samples: 4
Max nTPM: 132.2
Min nTPM: 99.1
RHH5305_R3671
99.1
RHH5213_R3584
132.2
RHH5241_R3613
112.8
RHH5270_R3642
114.5
Naive CD4 T-cell nTPM: 89.2
Samples: 4
Max nTPM: 104.5
Min nTPM: 58.5
RHH5306_R3672
58.5
RHH5214_R3585
93.2
RHH5242_R3614
100.7
RHH5271_R3643
104.5
Naive CD8 T-cell nTPM: 81.3
Samples: 4
Max nTPM: 104.6
Min nTPM: 70.1
RHH5201_R3572
104.6
RHH5229_R3601
75.0
RHH5258_R3630
75.4
RHH5287_R3659
70.1
Non-Vd2 gdTCR nTPM: 154.6
Samples: 4
Max nTPM: 170.1
Min nTPM: 132.6
RHH5235_R3607
157.3
RHH5264_R3636
158.3
RHH5207_R3578
170.1
RHH5299_R3665
132.6
T-reg nTPM: 102.6
Samples: 4
Max nTPM: 116.3
Min nTPM: 83.9
RHH5301_R3667
83.9
RHH5237_R3609
116.3
RHH5266_R3638
98.0
RHH5209_R3580
112.3
Terminal effector memory CD4 T-cell nTPM: 166.0
Samples: 2
Max nTPM: 192.8
Min nTPM: 139.2
RHH5243_R3615
192.8
RHH5272_R3644
139.2
Terminal effector memory CD8 T-cell nTPM: 161.5
Samples: 4
Max nTPM: 186.7
Min nTPM: 136.9
RHH5232_R3604
167.5
RHH5204_R3575
136.9
RHH5261_R3633
186.7
RHH5296_R3662
154.7
Vd2 gdTCR nTPM: 128.8
Samples: 4
Max nTPM: 158.8
Min nTPM: 88.8
RHH5234_R3606
113.7
RHH5206_R3577
158.8
RHH5263_R3635
153.9
RHH5298_R3664
88.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
