HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:63.7 nTPM
HPA Brain:76.3 nTPM
GTEx:63.7 nTPM
FANTOM5:49.5 Scaled Tags Per Million
Pig:46.2 nTPM
Mouse:42.5 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.3
Sample id Sample description nTPM
Hippocampus
nTPM: 62.0
2529 Female, age 94, left hemisphere 77.1
1911 Female, age 85, right hemisphere 70.4
2621 Female, age 67, right hemisphere 70.2
2148 Female, age 91, left hemisphere 56.2
1898 Male, age 80, left hemisphere 55.9
1855 Male, age 76, left hemisphere 42.2
Dentate gyrus
nTPM: 47.9
2531 Female, age 67, both hemispheres 70.4
1927 Female, age 91, both hemispheres 59.6
2528 Male, age 74, both hemispheres 49.3
2246 Female, age 85, both hemispheres 44.3
2010 Male, age 76, both hemispheres 41.5
2530 Female, age 94, left hemisphere 22.1
Entorhinal gyrus
nTPM: 76.3
2613 Female, age 94, left hemisphere 136.2
2764 Male, age 80, right hemisphere 81.0
1787 Male, age 76, left hemisphere 70.7
2686 Male, age 75, right hemisphere 62.8
1938 Female, age 85, left hemisphere 60.4
2117 Female, age 91, right hemisphere 46.6
Hippocampus, CA1
nTPM: 75.7
2749 Male, age 80, left hemisphere 116.1
2527 Male, age 74, both hemispheres 89.5
2082 Female, age 91, right hemisphere 72.8
2045 Male, age 76, both hemispheres 63.7
1873 Female, age 85, both hemispheres 36.3
Hippocampus, CA2
nTPM: 58.3
2113 Female, age 91, right hemisphere 78.2
2249 Male, age 74, both hemispheres 73.2
2437 Female, age 94, left hemisphere 56.3
1940 Female, age 85, left hemisphere 54.8
1963 Male, age 80, left hemisphere 47.0
1892 Male, age 76, both hemispheres 40.2
Hippocampus, CA3
nTPM: 65.4
2137 Male, age 80, left hemisphere 117.1
2620 Female, age 94, left hemisphere 64.4
2861 Female, age 67, both hemispheres 59.2
2436 Male, age 74, both hemispheres 56.5
1867 Male, age 76, both hemispheres 55.0
1891 Female, age 85, both hemispheres 40.1
Parahippocampal cortex
nTPM: 67.3
2245 Female, age 91, both hemispheres 96.7
2622 Female, age 67, right hemisphere 80.9
2018 Male, age 76, both hemispheres 72.7
1990 Female, age 91, right hemisphere 69.4
2250 Female, age 67, right hemisphere 65.1
2693 Female, age 94, both hemispheres 59.9
2532 Female, age 72, left hemisphere 59.3
1933 Female, age 85, both hemispheres 59.2
1850 Male, age 80, both hemispheres 59.0
2692 Male, age 74, both hemispheres 50.5
Perirhinal gyrus
nTPM: 73.0
1847 Female, age 91, left hemisphere 91.3
2521 Female, age 94, right hemisphere 88.6
1794 Male, age 80, right hemisphere 68.8
2848 Male, age 76, right hemisphere 59.7
1841 Female, age 85, right hemisphere 56.5
Subiculum
nTPM: 55.9
1901 Male, age 80, both hemispheres 64.1
2729 Female, age 91, right hemisphere 56.5
2619 Male, age 74, both hemispheres 56.1
1977 Female, age 85, both hemispheres 55.6
2042 Male, age 76, both hemispheres 54.4
2438 Female, age 94, left hemisphere 48.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.7
Samples: 197

Max nTPM: 287.6
Min nTPM: 1.7
Std nTPM: 42.7
Median nTPM: 55.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 287.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 184.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 182.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 169.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 167.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 154.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 153.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 149.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 147.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 146.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 146.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.5
FF:10169-103B7 60 years, female 52.9
FF:10153-102I9 76 years, female 46.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.2
Pig sample Sample description nTPM
Subiculum
nTPM: 30.1
Samples: 4

Max nTPM: 37.4
Min nTPM: 22.1
Sample A Female 37.4
Sample B Female 25.0
Sample C Male 36.0
Sample D Male 22.1
Dorsal hippocampus
nTPM: 39.5
Samples: 4

Max nTPM: 47.4
Min nTPM: 24.3
Sample A Female 47.4
Sample B Female 38.8
Sample C Male 47.3
Sample D Male 24.3
Entorhinal cortex
nTPM: 46.2
Samples: 4

Max nTPM: 54.8
Min nTPM: 35.7
Sample A Female 49.2
Sample B Female 44.9
Sample C Male 54.8
Sample D Male 35.7
Ventral hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 60.0
Min nTPM: 30.9
Sample A Female 34.5
Sample B Female 30.9
Sample C Male 41.5
Sample D Male 60.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.5
Samples: 4

Max nTPM: 50.7
Min nTPM: 32.3
Sample A Male 50.0
Sample B Male 50.7
Sample C Female 32.3
Sample D Female 36.9
Hippocampal formation
nTPM: 25.7
Samples: 4

Max nTPM: 27.4
Min nTPM: 22.2
Sample A Male 27.4
Sample B Male 26.7
Sample C Female 22.2
Sample D Female 26.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
74641310 Antisense, RP_060220_05_H06, Mouse strain C57BL/6J (56 days, male) 0.6
100145349 Antisense, RP_110519_02_H06, Mouse strain C57BL/6J (56 days, male) 0.1

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