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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.0
nTPM
Monaco:
212.2
nTPM
Schmiedel:
125.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.0
HPA sample
nTPM
gdT-cell nTPM: 13.5
Samples: 6
Max nTPM: 18.6
Min nTPM: 7.0
P10809_1007
10.2
P10809_1022
15.3
P10809_1041
15.8
P10809_1060
18.6
P10809_1077
14.1
P10809_1098
7.0
MAIT T-cell nTPM: 15.0
Samples: 6
Max nTPM: 19.7
Min nTPM: 8.1
P10809_1006
9.8
P10809_1024
19.1
P10809_1043
17.7
P10809_1062
19.7
P10809_1083
15.4
P10809_1097
8.1
Memory CD4 T-cell nTPM: 19.7
Samples: 6
Max nTPM: 34.7
Min nTPM: 13.4
P10809_1014
13.4
P10809_1026
18.1
P10809_1045
14.2
P10809_1064
34.7
P10809_1086
21.7
P10809_1113
15.8
Memory CD8 T-cell nTPM: 14.0
Samples: 5
Max nTPM: 18.1
Min nTPM: 10.4
P10809_1012
14.1
P10809_1027
12.9
P10809_1046
10.4
P10809_1065
18.1
P10809_1111
14.4
Naive CD4 T-cell nTPM: 23.6
Samples: 6
Max nTPM: 29.4
Min nTPM: 15.5
P10809_1015
15.5
P10809_1030
25.9
P10809_1049
23.6
P10809_1068
29.4
P10809_1085
29.0
P10809_1112
18.3
Naive CD8 T-cell nTPM: 13.8
Samples: 6
Max nTPM: 18.0
Min nTPM: 10.6
P10809_1016
12.2
P10809_1031
15.3
P10809_1050
13.1
P10809_1069
18.0
P10809_1087
13.6
P10809_1110
10.6
T-reg nTPM: 59.0
Samples: 6
Max nTPM: 95.8
Min nTPM: 43.6
P10809_1018
43.6
P10809_1037
49.9
P10809_1056
60.4
P10809_1075
95.8
P10809_1094
55.0
P10809_1106
49.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
212.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 125.3
Samples: 4
Max nTPM: 153.4
Min nTPM: 84.7
RHH5202_R3573
153.4
RHH5230_R3602
84.7
RHH5259_R3631
138.7
RHH5288_R3660
124.4
Effector memory CD8 T-cell nTPM: 92.9
Samples: 4
Max nTPM: 110.5
Min nTPM: 80.4
RHH5203_R3574
110.5
RHH5231_R3603
80.4
RHH5260_R3632
85.7
RHH5289_R3661
95.1
MAIT T-cell nTPM: 107.0
Samples: 4
Max nTPM: 128.7
Min nTPM: 92.3
RHH5233_R3605
106.6
RHH5205_R3576
128.7
RHH5262_R3634
92.3
RHH5297_R3663
100.5
Memory CD4 T-cell TFH nTPM: 151.0
Samples: 4
Max nTPM: 217.6
Min nTPM: 99.1
RHH5300_R3666
140.5
RHH5236_R3608
99.1
RHH5265_R3637
146.9
RHH5208_R3579
217.6
Memory CD4 T-cell Th1 nTPM: 107.6
Samples: 4
Max nTPM: 121.1
Min nTPM: 95.8
RHH5210_R3581
121.1
RHH5302_R3668
109.2
RHH5238_R3610
95.8
RHH5267_R3639
104.3
Memory CD4 T-cell Th1/Th17 nTPM: 133.4
Samples: 4
Max nTPM: 167.0
Min nTPM: 116.6
RHH5303_R3669
122.0
RHH5211_R3582
127.9
RHH5239_R3611
167.0
RHH5268_R3640
116.6
Memory CD4 T-cell Th17 nTPM: 110.2
Samples: 4
Max nTPM: 125.7
Min nTPM: 80.9
RHH5304_R3670
110.0
RHH5212_R3583
125.7
RHH5240_R3612
80.9
RHH5269_R3641
124.1
Memory CD4 T-cell Th2 nTPM: 123.7
Samples: 4
Max nTPM: 141.8
Min nTPM: 96.1
RHH5305_R3671
141.8
RHH5213_R3584
128.0
RHH5241_R3613
96.1
RHH5270_R3642
128.9
Naive CD4 T-cell nTPM: 139.6
Samples: 4
Max nTPM: 157.3
Min nTPM: 127.2
RHH5306_R3672
127.2
RHH5214_R3585
157.3
RHH5242_R3614
128.3
RHH5271_R3643
145.6
Naive CD8 T-cell nTPM: 100.1
Samples: 4
Max nTPM: 125.0
Min nTPM: 81.2
RHH5201_R3572
125.0
RHH5229_R3601
102.9
RHH5258_R3630
81.2
RHH5287_R3659
91.2
Non-Vd2 gdTCR nTPM: 113.6
Samples: 4
Max nTPM: 171.6
Min nTPM: 85.4
RHH5235_R3607
89.6
RHH5264_R3636
107.7
RHH5207_R3578
171.6
RHH5299_R3665
85.4
T-reg nTPM: 212.2
Samples: 4
Max nTPM: 261.0
Min nTPM: 186.9
RHH5301_R3667
212.5
RHH5237_R3609
188.3
RHH5266_R3638
186.9
RHH5209_R3580
261.0
Terminal effector memory CD4 T-cell nTPM: 118.6
Samples: 2
Max nTPM: 155.4
Min nTPM: 81.8
RHH5243_R3615
81.8
RHH5272_R3644
155.4
Terminal effector memory CD8 T-cell nTPM: 116.0
Samples: 4
Max nTPM: 127.7
Min nTPM: 108.6
RHH5232_R3604
108.6
RHH5204_R3575
127.7
RHH5261_R3633
112.2
RHH5296_R3662
115.6
Vd2 gdTCR nTPM: 77.9
Samples: 4
Max nTPM: 87.1
Min nTPM: 63.3
RHH5234_R3606
63.3
RHH5206_R3577
81.8
RHH5263_R3635
87.1
RHH5298_R3664
79.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
