We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
42.4
nTPM
Monaco:
121.8
nTPM
Schmiedel:
87.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.4
HPA sample
nTPM
gdT-cell nTPM: 42.4
Samples: 6
Max nTPM: 60.3
Min nTPM: 23.6
P10809_1007
23.6
P10809_1022
56.5
P10809_1041
37.9
P10809_1060
41.5
P10809_1077
60.3
P10809_1098
34.8
MAIT T-cell nTPM: 17.6
Samples: 6
Max nTPM: 20.7
Min nTPM: 12.0
P10809_1006
16.8
P10809_1024
19.5
P10809_1043
17.8
P10809_1062
20.7
P10809_1083
18.9
P10809_1097
12.0
Memory CD4 T-cell nTPM: 29.9
Samples: 6
Max nTPM: 44.1
Min nTPM: 21.1
P10809_1014
25.5
P10809_1026
22.3
P10809_1045
21.1
P10809_1064
41.4
P10809_1086
44.1
P10809_1113
25.2
Memory CD8 T-cell nTPM: 35.5
Samples: 5
Max nTPM: 56.9
Min nTPM: 17.4
P10809_1012
28.3
P10809_1027
45.3
P10809_1046
29.7
P10809_1065
56.9
P10809_1111
17.4
Naive CD4 T-cell nTPM: 15.4
Samples: 6
Max nTPM: 19.5
Min nTPM: 12.9
P10809_1015
13.8
P10809_1030
13.9
P10809_1049
12.9
P10809_1068
14.2
P10809_1085
19.5
P10809_1112
17.8
Naive CD8 T-cell nTPM: 25.3
Samples: 6
Max nTPM: 62.1
Min nTPM: 3.8
P10809_1016
3.8
P10809_1031
17.6
P10809_1050
19.6
P10809_1069
41.4
P10809_1087
62.1
P10809_1110
7.5
T-reg nTPM: 13.0
Samples: 6
Max nTPM: 21.1
Min nTPM: 7.1
P10809_1018
10.7
P10809_1037
21.1
P10809_1056
11.5
P10809_1075
12.0
P10809_1094
7.1
P10809_1106
15.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
121.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 30.7
Samples: 4
Max nTPM: 44.4
Min nTPM: 20.9
RHH5202_R3573
20.9
RHH5230_R3602
44.4
RHH5259_R3631
24.3
RHH5288_R3660
33.0
Effector memory CD8 T-cell nTPM: 78.0
Samples: 4
Max nTPM: 117.7
Min nTPM: 46.7
RHH5203_R3574
46.7
RHH5231_R3603
76.7
RHH5260_R3632
71.0
RHH5289_R3661
117.7
MAIT T-cell nTPM: 36.2
Samples: 4
Max nTPM: 49.3
Min nTPM: 29.5
RHH5233_R3605
49.3
RHH5205_R3576
31.6
RHH5262_R3634
29.5
RHH5297_R3663
34.4
Memory CD4 T-cell TFH nTPM: 25.6
Samples: 4
Max nTPM: 44.8
Min nTPM: 16.8
RHH5300_R3666
20.5
RHH5236_R3608
44.8
RHH5265_R3637
20.4
RHH5208_R3579
16.8
Memory CD4 T-cell Th1 nTPM: 30.4
Samples: 4
Max nTPM: 40.9
Min nTPM: 22.2
RHH5210_R3581
22.2
RHH5302_R3668
40.9
RHH5238_R3610
30.7
RHH5267_R3639
27.8
Memory CD4 T-cell Th1/Th17 nTPM: 44.3
Samples: 4
Max nTPM: 48.8
Min nTPM: 32.3
RHH5303_R3669
48.5
RHH5211_R3582
47.7
RHH5239_R3611
48.8
RHH5268_R3640
32.3
Memory CD4 T-cell Th17 nTPM: 62.4
Samples: 4
Max nTPM: 106.7
Min nTPM: 45.1
RHH5304_R3670
45.1
RHH5212_R3583
51.5
RHH5240_R3612
106.7
RHH5269_R3641
46.3
Memory CD4 T-cell Th2 nTPM: 55.8
Samples: 4
Max nTPM: 71.4
Min nTPM: 46.6
RHH5305_R3671
51.5
RHH5213_R3584
53.8
RHH5241_R3613
71.4
RHH5270_R3642
46.6
Naive CD4 T-cell nTPM: 30.4
Samples: 4
Max nTPM: 36.1
Min nTPM: 18.7
RHH5306_R3672
35.8
RHH5214_R3585
30.8
RHH5242_R3614
36.1
RHH5271_R3643
18.7
Naive CD8 T-cell nTPM: 3.2
Samples: 4
Max nTPM: 5.7
Min nTPM: 2.1
RHH5201_R3572
2.1
RHH5229_R3601
2.5
RHH5258_R3630
2.3
RHH5287_R3659
5.7
Non-Vd2 gdTCR nTPM: 90.3
Samples: 4
Max nTPM: 101.5
Min nTPM: 84.3
RHH5235_R3607
84.3
RHH5264_R3636
88.6
RHH5207_R3578
101.5
RHH5299_R3665
86.8
T-reg nTPM: 28.1
Samples: 4
Max nTPM: 37.7
Min nTPM: 13.1
RHH5301_R3667
25.0
RHH5237_R3609
36.4
RHH5266_R3638
13.1
RHH5209_R3580
37.7
Terminal effector memory CD4 T-cell nTPM: 121.9
Samples: 2
Max nTPM: 127.8
Min nTPM: 115.9
RHH5243_R3615
127.8
RHH5272_R3644
115.9
Terminal effector memory CD8 T-cell nTPM: 108.8
Samples: 4
Max nTPM: 144.4
Min nTPM: 68.0
RHH5232_R3604
105.1
RHH5204_R3575
68.0
RHH5261_R3633
144.4
RHH5296_R3662
117.6
Vd2 gdTCR nTPM: 52.8
Samples: 4
Max nTPM: 80.6
Min nTPM: 40.2
RHH5234_R3606
40.2
RHH5206_R3577
80.6
RHH5263_R3635
49.6
RHH5298_R3664
40.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
