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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
69.5
nTPM
Monaco:
130.0
nTPM
Schmiedel:
96.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.5
HPA sample
nTPM
gdT-cell nTPM: 51.4
Samples: 6
Max nTPM: 58.9
Min nTPM: 44.0
P10809_1007
45.3
P10809_1022
44.0
P10809_1041
58.9
P10809_1060
54.3
P10809_1077
50.3
P10809_1098
55.5
MAIT T-cell nTPM: 45.2
Samples: 6
Max nTPM: 62.6
Min nTPM: 34.1
P10809_1006
44.5
P10809_1024
44.1
P10809_1043
40.5
P10809_1062
45.4
P10809_1083
62.6
P10809_1097
34.1
Memory CD4 T-cell nTPM: 51.5
Samples: 6
Max nTPM: 69.6
Min nTPM: 45.6
P10809_1014
45.6
P10809_1026
69.6
P10809_1045
48.6
P10809_1064
52.5
P10809_1086
46.1
P10809_1113
46.5
Memory CD8 T-cell nTPM: 47.1
Samples: 5
Max nTPM: 56.4
Min nTPM: 41.1
P10809_1012
43.2
P10809_1027
44.7
P10809_1046
41.1
P10809_1065
50.1
P10809_1111
56.4
Naive CD4 T-cell nTPM: 48.4
Samples: 6
Max nTPM: 57.3
Min nTPM: 40.1
P10809_1015
47.6
P10809_1030
51.2
P10809_1049
40.1
P10809_1068
49.2
P10809_1085
57.3
P10809_1112
45.2
Naive CD8 T-cell nTPM: 56.5
Samples: 6
Max nTPM: 74.2
Min nTPM: 47.4
P10809_1016
51.7
P10809_1031
74.2
P10809_1050
48.1
P10809_1069
64.9
P10809_1087
52.6
P10809_1110
47.4
T-reg nTPM: 69.5
Samples: 6
Max nTPM: 90.0
Min nTPM: 53.1
P10809_1018
53.1
P10809_1037
75.9
P10809_1056
61.1
P10809_1075
72.4
P10809_1094
64.5
P10809_1106
90.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 101.4
Samples: 4
Max nTPM: 127.1
Min nTPM: 87.0
RHH5202_R3573
98.3
RHH5230_R3602
93.0
RHH5259_R3631
87.0
RHH5288_R3660
127.1
Effector memory CD8 T-cell nTPM: 108.5
Samples: 4
Max nTPM: 131.8
Min nTPM: 79.1
RHH5203_R3574
119.3
RHH5231_R3603
79.1
RHH5260_R3632
131.8
RHH5289_R3661
103.8
MAIT T-cell nTPM: 86.2
Samples: 4
Max nTPM: 104.3
Min nTPM: 68.9
RHH5233_R3605
68.9
RHH5205_R3576
104.3
RHH5262_R3634
102.3
RHH5297_R3663
69.1
Memory CD4 T-cell TFH nTPM: 126.9
Samples: 4
Max nTPM: 158.3
Min nTPM: 85.8
RHH5300_R3666
120.6
RHH5236_R3608
143.0
RHH5265_R3637
85.8
RHH5208_R3579
158.3
Memory CD4 T-cell Th1 nTPM: 98.9
Samples: 4
Max nTPM: 119.1
Min nTPM: 75.2
RHH5210_R3581
119.1
RHH5302_R3668
112.5
RHH5238_R3610
75.2
RHH5267_R3639
88.8
Memory CD4 T-cell Th1/Th17 nTPM: 107.0
Samples: 4
Max nTPM: 135.8
Min nTPM: 95.1
RHH5303_R3669
135.8
RHH5211_R3582
102.1
RHH5239_R3611
95.1
RHH5268_R3640
95.1
Memory CD4 T-cell Th17 nTPM: 98.3
Samples: 4
Max nTPM: 133.3
Min nTPM: 70.9
RHH5304_R3670
80.1
RHH5212_R3583
133.3
RHH5240_R3612
109.0
RHH5269_R3641
70.9
Memory CD4 T-cell Th2 nTPM: 117.8
Samples: 4
Max nTPM: 144.0
Min nTPM: 97.9
RHH5305_R3671
121.3
RHH5213_R3584
144.0
RHH5241_R3613
108.0
RHH5270_R3642
97.9
Naive CD4 T-cell nTPM: 117.8
Samples: 4
Max nTPM: 166.2
Min nTPM: 86.6
RHH5306_R3672
86.6
RHH5214_R3585
166.2
RHH5242_R3614
93.7
RHH5271_R3643
124.5
Naive CD8 T-cell nTPM: 123.5
Samples: 4
Max nTPM: 151.7
Min nTPM: 81.1
RHH5201_R3572
151.7
RHH5229_R3601
81.1
RHH5258_R3630
144.7
RHH5287_R3659
116.3
Non-Vd2 gdTCR nTPM: 102.9
Samples: 4
Max nTPM: 159.9
Min nTPM: 60.6
RHH5235_R3607
60.6
RHH5264_R3636
159.9
RHH5207_R3578
100.4
RHH5299_R3665
90.5
T-reg nTPM: 130.0
Samples: 4
Max nTPM: 159.8
Min nTPM: 101.9
RHH5301_R3667
145.8
RHH5237_R3609
112.4
RHH5266_R3638
101.9
RHH5209_R3580
159.8
Terminal effector memory CD4 T-cell nTPM: 89.1
Samples: 2
Max nTPM: 104.0
Min nTPM: 74.1
RHH5243_R3615
74.1
RHH5272_R3644
104.0
Terminal effector memory CD8 T-cell nTPM: 107.5
Samples: 4
Max nTPM: 176.4
Min nTPM: 66.9
RHH5232_R3604
77.2
RHH5204_R3575
176.4
RHH5261_R3633
109.4
RHH5296_R3662
66.9
Vd2 gdTCR nTPM: 101.5
Samples: 4
Max nTPM: 143.8
Min nTPM: 64.2
RHH5234_R3606
64.2
RHH5206_R3577
143.8
RHH5263_R3635
119.7
RHH5298_R3664
78.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
