HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:592.5 nTPM
HPA Brain:837.9 nTPM
GTEx:592.5 nTPM
FANTOM5:1263.2 Scaled Tags Per Million
Pig:661.2 nTPM
Mouse:630.7 nTPM
Allen mouse:27.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 837.9
Sample id Sample description nTPM
Hippocampus
nTPM: 837.9
1855 Male, age 76, left hemisphere 1038.0
1898 Male, age 80, left hemisphere 912.1
2148 Female, age 91, left hemisphere 807.3
2529 Female, age 94, left hemisphere 803.1
2621 Female, age 67, right hemisphere 753.6
1911 Female, age 85, right hemisphere 713.5
Dentate gyrus
nTPM: 694.1
2010 Male, age 76, both hemispheres 863.3
2246 Female, age 85, both hemispheres 789.6
2528 Male, age 74, both hemispheres 733.9
2530 Female, age 94, left hemisphere 691.8
1927 Female, age 91, both hemispheres 589.4
2531 Female, age 67, both hemispheres 496.8
Entorhinal gyrus
nTPM: 757.1
2117 Female, age 91, right hemisphere 1058.2
2686 Male, age 75, right hemisphere 768.9
1787 Male, age 76, left hemisphere 766.6
1938 Female, age 85, left hemisphere 745.0
2764 Male, age 80, right hemisphere 604.1
2613 Female, age 94, left hemisphere 600.0
Hippocampus, CA1
nTPM: 759.0
2749 Male, age 80, left hemisphere 924.6
2527 Male, age 74, both hemispheres 825.1
1873 Female, age 85, both hemispheres 812.6
2045 Male, age 76, both hemispheres 616.4
2082 Female, age 91, right hemisphere 616.1
Hippocampus, CA2
nTPM: 734.4
1892 Male, age 76, both hemispheres 892.1
2437 Female, age 94, left hemisphere 771.6
2249 Male, age 74, both hemispheres 731.5
1963 Male, age 80, left hemisphere 704.2
2113 Female, age 91, right hemisphere 665.3
1940 Female, age 85, left hemisphere 641.4
Hippocampus, CA3
nTPM: 698.2
1867 Male, age 76, both hemispheres 854.1
2137 Male, age 80, left hemisphere 778.8
2861 Female, age 67, both hemispheres 702.2
2436 Male, age 74, both hemispheres 666.2
1891 Female, age 85, both hemispheres 657.4
2620 Female, age 94, left hemisphere 530.5
Parahippocampal cortex
nTPM: 679.2
2250 Female, age 67, right hemisphere 957.7
1933 Female, age 85, both hemispheres 781.4
2692 Male, age 74, both hemispheres 739.6
2622 Female, age 67, right hemisphere 728.0
2693 Female, age 94, both hemispheres 672.5
2245 Female, age 91, both hemispheres 663.5
1850 Male, age 80, both hemispheres 600.2
2018 Male, age 76, both hemispheres 560.5
1990 Female, age 91, right hemisphere 556.7
2532 Female, age 72, left hemisphere 532.5
Perirhinal gyrus
nTPM: 690.8
1794 Male, age 80, right hemisphere 718.7
1847 Female, age 91, left hemisphere 689.5
2521 Female, age 94, right hemisphere 685.0
2848 Male, age 76, right hemisphere 681.9
1841 Female, age 85, right hemisphere 678.7
Subiculum
nTPM: 747.2
2729 Female, age 91, right hemisphere 922.7
2619 Male, age 74, both hemispheres 795.9
2438 Female, age 94, left hemisphere 728.0
2042 Male, age 76, both hemispheres 722.0
1901 Male, age 80, both hemispheres 668.4
1977 Female, age 85, both hemispheres 646.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 592.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 592.5
Samples: 197

Max nTPM: 1396.1
Min nTPM: 135.8
Std nTPM: 217.1
Median nTPM: 576.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1396.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 1176.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 1175.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 1040.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 1036.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1033.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1019.2
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 1013.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 1001.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 988.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 988.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1263.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1263.2
FF:10169-103B7 60 years, female 1448.8
FF:10153-102I9 76 years, female 1077.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 661.2
Pig sample Sample description nTPM
Subiculum
nTPM: 439.2
Samples: 4

Max nTPM: 558.8
Min nTPM: 376.9
Sample A Female 558.8
Sample B Female 376.9
Sample C Male 422.2
Sample D Male 398.7
Dorsal hippocampus
nTPM: 609.2
Samples: 4

Max nTPM: 820.6
Min nTPM: 410.5
Sample A Female 820.6
Sample B Female 690.3
Sample C Male 515.2
Sample D Male 410.5
Entorhinal cortex
nTPM: 476.3
Samples: 4

Max nTPM: 548.8
Min nTPM: 382.7
Sample A Female 548.8
Sample B Female 474.6
Sample C Male 499.0
Sample D Male 382.7
Ventral hippocampus
nTPM: 661.2
Samples: 4

Max nTPM: 774.2
Min nTPM: 351.6
Sample A Female 748.1
Sample B Female 351.6
Sample C Male 770.8
Sample D Male 774.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 630.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 539.2
Samples: 4

Max nTPM: 582.6
Min nTPM: 488.1
Sample A Male 488.1
Sample B Male 547.0
Sample C Female 538.9
Sample D Female 582.6
Hippocampal formation
nTPM: 630.7
Samples: 4

Max nTPM: 685.1
Min nTPM: 609.3
Sample A Male 616.3
Sample B Male 609.3
Sample C Female 685.1
Sample D Female 612.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 27.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.1
68196976 Antisense, RP_040928_01_A06, Mouse strain C57BL/6J (56 days, male) 29.6
67936207 Antisense, RP_040928_01_A06, Mouse strain C57BL/6J (56 days, male) 28.7
77414652 Antisense, RP_070205_01_H10, Mouse strain C57BL/6J (56 days, male) 24.6

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