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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
64.3
nTPM
Monaco:
70.8
nTPM
Schmiedel:
94.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.3
HPA sample
nTPM
gdT-cell nTPM: 12.6
Samples: 6
Max nTPM: 23.2
Min nTPM: 6.8
P10809_1007
10.6
P10809_1022
10.5
P10809_1041
23.2
P10809_1060
8.4
P10809_1077
6.8
P10809_1098
15.8
MAIT T-cell nTPM: 33.3
Samples: 6
Max nTPM: 54.5
Min nTPM: 17.4
P10809_1006
29.9
P10809_1024
47.0
P10809_1043
17.4
P10809_1062
32.3
P10809_1083
54.5
P10809_1097
18.4
Memory CD4 T-cell nTPM: 39.8
Samples: 6
Max nTPM: 50.1
Min nTPM: 25.5
P10809_1014
30.5
P10809_1026
44.8
P10809_1045
47.9
P10809_1064
40.1
P10809_1086
50.1
P10809_1113
25.5
Memory CD8 T-cell nTPM: 33.1
Samples: 5
Max nTPM: 40.9
Min nTPM: 21.7
P10809_1012
40.9
P10809_1027
21.7
P10809_1046
39.1
P10809_1065
27.7
P10809_1111
36.2
Naive CD4 T-cell nTPM: 38.2
Samples: 6
Max nTPM: 47.3
Min nTPM: 33.6
P10809_1015
33.6
P10809_1030
34.2
P10809_1049
37.7
P10809_1068
39.5
P10809_1085
47.3
P10809_1112
36.7
Naive CD8 T-cell nTPM: 31.6
Samples: 6
Max nTPM: 47.8
Min nTPM: 7.5
P10809_1016
47.8
P10809_1031
23.9
P10809_1050
31.9
P10809_1069
36.3
P10809_1087
7.5
P10809_1110
42.4
T-reg nTPM: 64.3
Samples: 6
Max nTPM: 142.0
Min nTPM: 22.9
P10809_1018
27.7
P10809_1037
77.5
P10809_1056
142.0
P10809_1075
57.1
P10809_1094
22.9
P10809_1106
58.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 63.4
Samples: 4
Max nTPM: 91.2
Min nTPM: 47.9
RHH5202_R3573
47.9
RHH5230_R3602
91.2
RHH5259_R3631
51.0
RHH5288_R3660
63.3
Effector memory CD8 T-cell nTPM: 30.9
Samples: 4
Max nTPM: 51.1
Min nTPM: 19.5
RHH5203_R3574
25.4
RHH5231_R3603
27.5
RHH5260_R3632
51.1
RHH5289_R3661
19.5
MAIT T-cell nTPM: 37.0
Samples: 4
Max nTPM: 38.4
Min nTPM: 34.9
RHH5233_R3605
36.3
RHH5205_R3576
38.3
RHH5262_R3634
38.4
RHH5297_R3663
34.9
Memory CD4 T-cell TFH nTPM: 29.1
Samples: 4
Max nTPM: 44.6
Min nTPM: 10.8
RHH5300_R3666
28.1
RHH5236_R3608
44.6
RHH5265_R3637
32.7
RHH5208_R3579
10.8
Memory CD4 T-cell Th1 nTPM: 38.6
Samples: 4
Max nTPM: 46.4
Min nTPM: 28.4
RHH5210_R3581
28.4
RHH5302_R3668
34.7
RHH5238_R3610
46.4
RHH5267_R3639
45.0
Memory CD4 T-cell Th1/Th17 nTPM: 57.1
Samples: 4
Max nTPM: 71.7
Min nTPM: 35.7
RHH5303_R3669
35.7
RHH5211_R3582
71.7
RHH5239_R3611
66.9
RHH5268_R3640
53.9
Memory CD4 T-cell Th17 nTPM: 53.5
Samples: 4
Max nTPM: 64.7
Min nTPM: 48.7
RHH5304_R3670
51.8
RHH5212_R3583
48.9
RHH5240_R3612
64.7
RHH5269_R3641
48.7
Memory CD4 T-cell Th2 nTPM: 49.7
Samples: 4
Max nTPM: 72.9
Min nTPM: 22.0
RHH5305_R3671
72.9
RHH5213_R3584
49.4
RHH5241_R3613
22.0
RHH5270_R3642
54.4
Naive CD4 T-cell nTPM: 46.8
Samples: 4
Max nTPM: 48.1
Min nTPM: 46.0
RHH5306_R3672
48.1
RHH5214_R3585
46.7
RHH5242_R3614
46.0
RHH5271_R3643
46.4
Naive CD8 T-cell nTPM: 56.0
Samples: 4
Max nTPM: 82.4
Min nTPM: 17.0
RHH5201_R3572
17.0
RHH5229_R3601
61.4
RHH5258_R3630
63.0
RHH5287_R3659
82.4
Non-Vd2 gdTCR nTPM: 14.2
Samples: 4
Max nTPM: 25.8
Min nTPM: 6.6
RHH5235_R3607
25.8
RHH5264_R3636
17.1
RHH5207_R3578
6.6
RHH5299_R3665
7.2
T-reg nTPM: 70.8
Samples: 4
Max nTPM: 79.3
Min nTPM: 61.6
RHH5301_R3667
69.0
RHH5237_R3609
73.1
RHH5266_R3638
79.3
RHH5209_R3580
61.6
Terminal effector memory CD4 T-cell nTPM: 32.9
Samples: 2
Max nTPM: 59.4
Min nTPM: 6.4
RHH5243_R3615
6.4
RHH5272_R3644
59.4
Terminal effector memory CD8 T-cell nTPM: 10.2
Samples: 4
Max nTPM: 15.8
Min nTPM: 6.4
RHH5232_R3604
10.3
RHH5204_R3575
6.4
RHH5261_R3633
15.8
RHH5296_R3662
8.1
Vd2 gdTCR nTPM: 34.3
Samples: 4
Max nTPM: 49.5
Min nTPM: 12.8
RHH5234_R3606
49.5
RHH5206_R3577
12.8
RHH5263_R3635
41.1
RHH5298_R3664
33.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
