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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
116.4
nTPM
Monaco:
372.6
nTPM
Schmiedel:
148.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.4
HPA sample
nTPM
gdT-cell nTPM: 108.0
Samples: 6
Max nTPM: 120.0
Min nTPM: 96.6
P10809_1007
114.5
P10809_1022
119.1
P10809_1041
120.0
P10809_1060
96.6
P10809_1077
100.3
P10809_1098
97.5
MAIT T-cell nTPM: 91.8
Samples: 6
Max nTPM: 107.7
Min nTPM: 74.8
P10809_1006
92.0
P10809_1024
97.3
P10809_1043
74.8
P10809_1062
107.7
P10809_1083
86.3
P10809_1097
92.5
Memory CD4 T-cell nTPM: 98.2
Samples: 6
Max nTPM: 118.2
Min nTPM: 83.8
P10809_1014
98.6
P10809_1026
83.8
P10809_1045
118.2
P10809_1064
90.5
P10809_1086
93.4
P10809_1113
104.5
Memory CD8 T-cell nTPM: 89.1
Samples: 5
Max nTPM: 109.9
Min nTPM: 62.9
P10809_1012
88.8
P10809_1027
62.9
P10809_1046
109.9
P10809_1065
100.2
P10809_1111
83.6
Naive CD4 T-cell nTPM: 64.4
Samples: 6
Max nTPM: 78.0
Min nTPM: 46.9
P10809_1015
56.0
P10809_1030
61.9
P10809_1049
46.9
P10809_1068
78.0
P10809_1085
68.6
P10809_1112
75.2
Naive CD8 T-cell nTPM: 70.2
Samples: 6
Max nTPM: 89.9
Min nTPM: 53.7
P10809_1016
53.7
P10809_1031
60.7
P10809_1050
76.1
P10809_1069
89.9
P10809_1087
78.6
P10809_1110
62.3
T-reg nTPM: 116.4
Samples: 6
Max nTPM: 130.1
Min nTPM: 99.4
P10809_1018
130.1
P10809_1037
118.0
P10809_1056
99.4
P10809_1075
121.5
P10809_1094
126.7
P10809_1106
102.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
372.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 235.4
Samples: 4
Max nTPM: 250.9
Min nTPM: 209.0
RHH5202_R3573
250.9
RHH5230_R3602
235.1
RHH5259_R3631
209.0
RHH5288_R3660
246.6
Effector memory CD8 T-cell nTPM: 311.3
Samples: 4
Max nTPM: 343.7
Min nTPM: 268.0
RHH5203_R3574
268.0
RHH5231_R3603
328.0
RHH5260_R3632
343.7
RHH5289_R3661
305.6
MAIT T-cell nTPM: 250.8
Samples: 4
Max nTPM: 353.4
Min nTPM: 207.0
RHH5233_R3605
223.1
RHH5205_R3576
353.4
RHH5262_R3634
219.6
RHH5297_R3663
207.0
Memory CD4 T-cell TFH nTPM: 276.3
Samples: 4
Max nTPM: 295.8
Min nTPM: 242.7
RHH5300_R3666
283.7
RHH5236_R3608
242.7
RHH5265_R3637
282.8
RHH5208_R3579
295.8
Memory CD4 T-cell Th1 nTPM: 256.0
Samples: 4
Max nTPM: 322.1
Min nTPM: 177.3
RHH5210_R3581
177.3
RHH5302_R3668
255.3
RHH5238_R3610
269.1
RHH5267_R3639
322.1
Memory CD4 T-cell Th1/Th17 nTPM: 320.5
Samples: 4
Max nTPM: 326.8
Min nTPM: 312.9
RHH5303_R3669
321.7
RHH5211_R3582
326.8
RHH5239_R3611
312.9
RHH5268_R3640
320.6
Memory CD4 T-cell Th17 nTPM: 372.6
Samples: 4
Max nTPM: 488.2
Min nTPM: 312.4
RHH5304_R3670
359.6
RHH5212_R3583
330.0
RHH5240_R3612
488.2
RHH5269_R3641
312.4
Memory CD4 T-cell Th2 nTPM: 365.1
Samples: 4
Max nTPM: 403.7
Min nTPM: 327.1
RHH5305_R3671
327.1
RHH5213_R3584
403.7
RHH5241_R3613
364.1
RHH5270_R3642
365.5
Naive CD4 T-cell nTPM: 207.5
Samples: 4
Max nTPM: 216.6
Min nTPM: 190.3
RHH5306_R3672
190.3
RHH5214_R3585
216.6
RHH5242_R3614
216.1
RHH5271_R3643
207.1
Naive CD8 T-cell nTPM: 165.6
Samples: 4
Max nTPM: 209.5
Min nTPM: 124.3
RHH5201_R3572
209.5
RHH5229_R3601
124.3
RHH5258_R3630
168.6
RHH5287_R3659
160.1
Non-Vd2 gdTCR nTPM: 308.8
Samples: 4
Max nTPM: 382.3
Min nTPM: 244.7
RHH5235_R3607
300.7
RHH5264_R3636
307.3
RHH5207_R3578
382.3
RHH5299_R3665
244.7
T-reg nTPM: 256.9
Samples: 4
Max nTPM: 279.7
Min nTPM: 225.7
RHH5301_R3667
225.7
RHH5237_R3609
279.7
RHH5266_R3638
278.7
RHH5209_R3580
243.6
Terminal effector memory CD4 T-cell nTPM: 297.9
Samples: 2
Max nTPM: 349.4
Min nTPM: 246.4
RHH5243_R3615
246.4
RHH5272_R3644
349.4
Terminal effector memory CD8 T-cell nTPM: 315.3
Samples: 4
Max nTPM: 381.7
Min nTPM: 273.5
RHH5232_R3604
273.5
RHH5204_R3575
290.4
RHH5261_R3633
381.7
RHH5296_R3662
315.7
Vd2 gdTCR nTPM: 271.0
Samples: 4
Max nTPM: 347.6
Min nTPM: 218.5
RHH5234_R3606
241.0
RHH5206_R3577
347.6
RHH5263_R3635
276.7
RHH5298_R3664
218.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
