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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
115.6
nTPM
Monaco:
82.3
nTPM
Schmiedel:
35.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.6
HPA sample
nTPM
gdT-cell nTPM: 63.1
Samples: 6
Max nTPM: 83.8
Min nTPM: 49.6
P10809_1007
49.6
P10809_1022
65.4
P10809_1041
83.8
P10809_1060
71.8
P10809_1077
52.5
P10809_1098
55.6
MAIT T-cell nTPM: 51.1
Samples: 6
Max nTPM: 67.6
Min nTPM: 36.4
P10809_1006
36.4
P10809_1024
50.3
P10809_1043
58.2
P10809_1062
67.6
P10809_1083
49.4
P10809_1097
44.9
Memory CD4 T-cell nTPM: 65.9
Samples: 6
Max nTPM: 73.1
Min nTPM: 51.1
P10809_1014
51.1
P10809_1026
64.4
P10809_1045
73.1
P10809_1064
71.3
P10809_1086
69.0
P10809_1113
66.2
Memory CD8 T-cell nTPM: 67.5
Samples: 5
Max nTPM: 78.6
Min nTPM: 56.3
P10809_1012
56.3
P10809_1027
73.9
P10809_1046
66.2
P10809_1065
78.6
P10809_1111
62.5
Naive CD4 T-cell nTPM: 55.1
Samples: 6
Max nTPM: 75.8
Min nTPM: 38.2
P10809_1015
38.2
P10809_1030
58.5
P10809_1049
75.8
P10809_1068
53.3
P10809_1085
55.4
P10809_1112
49.1
Naive CD8 T-cell nTPM: 55.8
Samples: 6
Max nTPM: 69.8
Min nTPM: 43.7
P10809_1016
43.7
P10809_1031
58.9
P10809_1050
55.0
P10809_1069
69.8
P10809_1087
63.4
P10809_1110
43.9
T-reg nTPM: 115.6
Samples: 6
Max nTPM: 135.2
Min nTPM: 76.4
P10809_1018
76.4
P10809_1037
128.0
P10809_1056
135.2
P10809_1075
132.3
P10809_1094
103.1
P10809_1106
118.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 75.5
Samples: 4
Max nTPM: 93.5
Min nTPM: 53.6
RHH5202_R3573
90.8
RHH5230_R3602
53.6
RHH5259_R3631
64.0
RHH5288_R3660
93.5
Effector memory CD8 T-cell nTPM: 82.3
Samples: 4
Max nTPM: 94.8
Min nTPM: 75.1
RHH5203_R3574
75.6
RHH5231_R3603
94.8
RHH5260_R3632
83.6
RHH5289_R3661
75.1
MAIT T-cell nTPM: 58.2
Samples: 4
Max nTPM: 69.4
Min nTPM: 41.5
RHH5233_R3605
41.5
RHH5205_R3576
66.8
RHH5262_R3634
55.1
RHH5297_R3663
69.4
Memory CD4 T-cell TFH nTPM: 77.6
Samples: 4
Max nTPM: 100.0
Min nTPM: 65.7
RHH5300_R3666
65.7
RHH5236_R3608
100.0
RHH5265_R3637
67.5
RHH5208_R3579
77.0
Memory CD4 T-cell Th1 nTPM: 77.3
Samples: 4
Max nTPM: 87.2
Min nTPM: 66.5
RHH5210_R3581
75.9
RHH5302_R3668
79.6
RHH5238_R3610
87.2
RHH5267_R3639
66.5
Memory CD4 T-cell Th1/Th17 nTPM: 72.9
Samples: 4
Max nTPM: 91.6
Min nTPM: 55.0
RHH5303_R3669
91.6
RHH5211_R3582
68.9
RHH5239_R3611
76.0
RHH5268_R3640
55.0
Memory CD4 T-cell Th17 nTPM: 66.8
Samples: 4
Max nTPM: 75.9
Min nTPM: 62.7
RHH5304_R3670
75.9
RHH5212_R3583
62.7
RHH5240_R3612
65.8
RHH5269_R3641
62.9
Memory CD4 T-cell Th2 nTPM: 71.5
Samples: 4
Max nTPM: 80.5
Min nTPM: 64.0
RHH5305_R3671
64.0
RHH5213_R3584
66.3
RHH5241_R3613
80.5
RHH5270_R3642
75.1
Naive CD4 T-cell nTPM: 63.9
Samples: 4
Max nTPM: 78.3
Min nTPM: 46.8
RHH5306_R3672
62.9
RHH5214_R3585
78.3
RHH5242_R3614
67.5
RHH5271_R3643
46.8
Naive CD8 T-cell nTPM: 45.9
Samples: 4
Max nTPM: 51.5
Min nTPM: 42.6
RHH5201_R3572
51.5
RHH5229_R3601
43.8
RHH5258_R3630
45.7
RHH5287_R3659
42.6
Non-Vd2 gdTCR nTPM: 75.2
Samples: 4
Max nTPM: 88.5
Min nTPM: 46.6
RHH5235_R3607
46.6
RHH5264_R3636
88.5
RHH5207_R3578
84.1
RHH5299_R3665
81.6
T-reg nTPM: 71.7
Samples: 4
Max nTPM: 90.6
Min nTPM: 52.2
RHH5301_R3667
85.9
RHH5237_R3609
90.6
RHH5266_R3638
52.2
RHH5209_R3580
58.1
Terminal effector memory CD4 T-cell nTPM: 58.5
Samples: 2
Max nTPM: 61.4
Min nTPM: 55.6
RHH5243_R3615
61.4
RHH5272_R3644
55.6
Terminal effector memory CD8 T-cell nTPM: 79.0
Samples: 4
Max nTPM: 90.6
Min nTPM: 70.8
RHH5232_R3604
75.4
RHH5204_R3575
79.3
RHH5261_R3633
70.8
RHH5296_R3662
90.6
Vd2 gdTCR nTPM: 67.0
Samples: 4
Max nTPM: 76.9
Min nTPM: 59.8
RHH5234_R3606
59.8
RHH5206_R3577
69.9
RHH5263_R3635
76.9
RHH5298_R3664
61.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
