We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CAB39
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CAB39
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CAB39
Synonyms CGI-66, MO25
Gene descriptioni

Full gene name according to HGNC.

Calcium binding protein 39
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband q37.1
Chromosome location (bp) 230712842 - 230821075
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000135932 (version 109)
Entrez gene 51719
HGNC HGNC:20292
UniProt Q9Y376 (UniProt - Evidence at protein level)
neXtProt NX_Q9Y376
GeneCards CAB39
Antibodypedia CAB39 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of a complex that binds and activates STK11/LKB1. In the complex, required to stabilize the interaction between CAB39/MO25 (CAB39/MO25alpha or CAB39L/MO25beta) and STK11/LKB1.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables kinase binding activity and protein serine/threonine kinase activator activity. Involved in intracellular signal transduction; peptidyl-serine phosphorylation; and positive regulation of protein phosphorylation. Located in extracellular exosome. Implicated in hepatocellular carcinoma. Biomarker of hepatocellular carcinoma and pancreatic cancer. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CAB39-201
ENSP00000258418
ENST00000258418
Q9Y376
[Direct mapping] Calcium-binding protein 39
Show all
A0A024R496
[Target identity:100%; Query identity:100%] Calcium binding protein 39, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0007165 [signal transduction]
GO:0010800 [positive regulation of peptidyl-threonine phosphorylation]
GO:0014823 [response to activity]
GO:0016020 [membrane]
GO:0018105 [peptidyl-serine phosphorylation]
GO:0019900 [kinase binding]
GO:0030018 [Z disc]
GO:0030295 [protein kinase activator activity]
GO:0032147 [activation of protein kinase activity]
GO:0032991 [protein-containing complex]
GO:0034774 [secretory granule lumen]
GO:0035556 [intracellular signal transduction]
GO:0043539 [protein serine/threonine kinase activator activity]
GO:0070062 [extracellular exosome]
GO:0071476 [cellular hypotonic response]
GO:0071902 [positive regulation of protein serine/threonine kinase activity]
GO:0097066 [response to thyroid hormone]
GO:1901017 [negative regulation of potassium ion transmembrane transporter activity]
GO:1901380 [negative regulation of potassium ion transmembrane transport]
GO:1902554 [serine/threonine protein kinase complex]
GO:1904813 [ficolin-1-rich granule lumen]
Show all
341 aa
39.9 kDa
No 0
CAB39-202
ENSP00000386238
ENST00000409788
Q9Y376
[Direct mapping] Calcium-binding protein 39
Show all
A0A024R496
[Target identity:100%; Query identity:100%] Calcium binding protein 39, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0007165 [signal transduction]
GO:0010800 [positive regulation of peptidyl-threonine phosphorylation]
GO:0018105 [peptidyl-serine phosphorylation]
GO:0019900 [kinase binding]
GO:0030295 [protein kinase activator activity]
GO:0032147 [activation of protein kinase activity]
GO:0034774 [secretory granule lumen]
GO:0035556 [intracellular signal transduction]
GO:0043539 [protein serine/threonine kinase activator activity]
GO:0070062 [extracellular exosome]
GO:0071476 [cellular hypotonic response]
GO:0071902 [positive regulation of protein serine/threonine kinase activity]
GO:1901017 [negative regulation of potassium ion transmembrane transporter activity]
GO:1901380 [negative regulation of potassium ion transmembrane transport]
GO:1902554 [serine/threonine protein kinase complex]
GO:1904813 [ficolin-1-rich granule lumen]
Show all
341 aa
39.9 kDa
No 0
CAB39-203
ENSP00000386642
ENST00000410084
Q9Y376
[Direct mapping] Calcium-binding protein 39
Show all
A0A024R496
[Target identity:100%; Query identity:100%] Calcium binding protein 39, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0007165 [signal transduction]
GO:0010800 [positive regulation of peptidyl-threonine phosphorylation]
GO:0018105 [peptidyl-serine phosphorylation]
GO:0019900 [kinase binding]
GO:0030295 [protein kinase activator activity]
GO:0032147 [activation of protein kinase activity]
GO:0034774 [secretory granule lumen]
GO:0035556 [intracellular signal transduction]
GO:0043539 [protein serine/threonine kinase activator activity]
GO:0070062 [extracellular exosome]
GO:0071476 [cellular hypotonic response]
GO:0071902 [positive regulation of protein serine/threonine kinase activity]
GO:1901017 [negative regulation of potassium ion transmembrane transporter activity]
GO:1901380 [negative regulation of potassium ion transmembrane transport]
GO:1902554 [serine/threonine protein kinase complex]
GO:1904813 [ficolin-1-rich granule lumen]
Show all
341 aa
39.9 kDa
No 0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org