PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:54.0 nTPM
FANTOM5:58.7 Scaled Tags Per Million
Pig:73.1 nTPM
Mouse:41.4 nTPM
Allen mouse:3.6 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 54.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 43.6
1984 Male, age 76, both hemispheres 45.1
2090 Male, age 80, both hemispheres 44.2
2301 Female, age 85, both hemispheres 43.8
2188 Female, age 91, both hemispheres 41.3
Area postrema
nTPM: 51.1
2799 Male, age 61, both hemispheres 58.0
2306 Male, age 80, both hemispheres 47.8
2054 Male, age 76, both hemispheres 47.3
Dorsal cochlear nucleus
nTPM: 49.0
2370 Male, age 61, both hemispheres 54.5
2058 Male, age 76, both hemispheres 51.7
2802 Male, age 74, right hemisphere 49.9
2378 Male, age 80, both hemispheres 45.3
2187 Female, age 91, both hemispheres 43.6
Dorsal medullary reticular nucleus
nTPM: 46.5
2088 Male, age 76, both hemispheres 48.9
2373 Male, age 61, both hemispheres 46.3
2040 Female, age 85, both hemispheres 44.3
Dorsal motor vagal complex
nTPM: 49.4
2643 Male, age 74, both hemispheres 58.4
2797 Male, age 61, both hemispheres 56.7
2185 Male, age 76, both hemispheres 56.2
2133 Female, age 91, both hemispheres 46.8
2844 Male, age 55, unknown 46.3
2000 Male, age 74, unknown 43.8
2813 Female, age 72, unknown 43.7
2807 Female, age 85, both hemispheres 43.2
Dorsal tegmental nucleus
nTPM: 47.2
2358 Male, age 61, both hemispheres 52.5
1936 Male, age 76, left hemisphere 48.2
2083 Male, age 80, both hemispheres 47.2
2326 Male, age 74, both hemispheres 40.9
Dorsolateral tegmental area
nTPM: 47.8
2337 Male, age 61, both hemispheres 59.9
2141 Male, age 76, both hemispheres 51.6
2654 Male, age 80, both hemispheres 46.4
2360 Male, age 74, both hemispheres 41.2
2751 Female, age 85, both hemispheres 39.6
Gigantocellular reticular nuclei, medullary
nTPM: 49.3
2462 Male, age 74, both hemispheres 63.9
2022 Male, age 76, right hemisphere 51.8
2310 Male, age 80, both hemispheres 50.4
2387 Female, age 91, both hemispheres 48.5
1876 Female, age 85, both hemispheres 42.5
2314 Male, age 61, both hemispheres 38.6
Gigantocellular reticular nuclei, pars
nTPM: 48.4
2168 Male, age 76, both hemispheres 55.8
2330 Male, age 80, both hemispheres 49.5
2706 Male, age 80, both hemispheres 48.7
2336 Male, age 61, both hemispheres 45.1
2084 Female, age 85, both hemispheres 42.8
Inferior olive
nTPM: 45.4
2628 Female, age 91, both hemispheres 48.2
2085 Female, age 85, both hemispheres 47.2
2379 Male, age 80, both hemispheres 46.9
2178 Male, age 61, both hemispheres 42.6
2563 Male, age 74, both hemispheres 42.0
Kolliker-Fuse nucleus
nTPM: 45.8
2163 Male, age 80, both hemispheres 48.7
2793 Female, age 91, left hemisphere 45.6
2315 Male, age 76, right hemisphere 43.1
Lateral lemniscal nuclei
nTPM: 52.4
2453 Male, age 74, right hemisphere 55.9
2036 Male, age 80, both hemispheres 55.4
2169 Male, age 76, both hemispheres 51.9
2746 Female, age 85, left hemisphere 51.1
2320 Female, age 91, left hemisphere 47.8
Lateral medullary reticular nucleus
nTPM: 46.1
2804 Female, age 91, both hemispheres 48.3
2044 Male, age 76, both hemispheres 48.2
2852 Male, age 80, both hemispheres 47.9
2374 Male, age 61, both hemispheres 45.8
2190 Female, age 85, both hemispheres 45.3
2305 Male, age 74, both hemispheres 40.8
Lateral parabrachial nucleus
nTPM: 47.5
2139 Female, age 85, right hemisphere 55.1
2790 Male, age 61, both hemispheres 50.7
2013 Male, age 80, both hemispheres 47.8
2792 Male, age 76, both hemispheres 36.3
Lateral vestibular nucleus
nTPM: 46.7
2184 Male, age 76, both hemispheres 46.7
2311 Male, age 80, both hemispheres 46.7
Locus coeruleus
nTPM: 45.6
2123 Female, age 91, both hemispheres 51.4
1980 Male, age 76, both hemispheres 47.8
2162 Male, age 80, both hemispheres 47.2
2720 Male, age 74, both hemispheres 46.3
2317 Female, age 72, unknown 46.2
2014 Male, age 55, unknown 41.6
2788 Male, age 74, unknown 38.9
Medial olivary nucleus
nTPM: 42.2
2851 Male, age 80, both hemispheres 48.2
2138 Female, age 91, both hemispheres 42.2
1943 Male, age 61, both hemispheres 40.8
1962 Male, age 76, both hemispheres 37.6
Medial parabrachial nucleus
nTPM: 46.1
2156 Male, age 61, both hemispheres 51.3
2786 Male, age 76, both hemispheres 47.9
2854 Male, age 80, both hemispheres 47.8
2170 Female, age 91, both hemispheres 45.3
2463 Female, age 85, right hemisphere 38.2
Medial periolivary nuclei
nTPM: 52.8
2171 Female, age 85, both hemispheres 64.3
2063 Male, age 76, both hemispheres 55.9
2791 Male, age 74, right hemisphere 48.1
2458 Female, age 91, both hemispheres 47.9
2081 Male, age 80, both hemispheres 47.8
Medial vestibular nucleus
nTPM: 49.4
2624 Male, age 61, both hemispheres 55.1
2093 Male, age 80, both hemispheres 52.0
2134 Male, age 76, both hemispheres 51.8
2743 Female, age 85, both hemispheres 46.9
2803 Female, age 91, both hemispheres 46.6
2801 Male, age 74, both hemispheres 44.1
Motor facial nucleus
nTPM: 53.7
2062 Male, age 76, both hemispheres 61.9
2795 Female, age 91, both hemispheres 59.0
2365 Male, age 74, right hemisphere 53.1
2327 Male, age 80, both hemispheres 52.8
2126 Male, age 61, both hemispheres 48.1
2697 Female, age 85, both hemispheres 47.1
Motor hypoglossal nucleus
nTPM: 46.4
2277 Male, age 76, both hemispheres 49.0
2125 Female, age 91, both hemispheres 47.8
2182 Male, age 80, both hemispheres 46.9
2132 Female, age 85, both hemispheres 45.8
2461 Male, age 61, both hemispheres 42.5
Motor trigeminal nucleus
nTPM: 48.1
2560 Male, age 74, both hemispheres 54.8
2079 Male, age 80, both hemispheres 50.3
2335 Male, age 61, both hemispheres 48.4
2321 Female, age 91, both hemispheres 45.2
2309 Male, age 76, both hemispheres 41.6
Nuclei of the trapezoid body
nTPM: 54.0
2735 Female, age 85, both hemispheres 63.1
1983 Male, age 76, both hemispheres 56.7
2159 Male, age 61, both hemispheres 53.9
2368 Female, age 91, both hemispheres 51.1
2166 Male, age 80, both hemispheres 45.4
Nucleus ambiguus
nTPM: 50.4
2096 Female, age 85, both hemispheres 57.5
2071 Male, age 76, both hemispheres 43.2
Nucleus cuneatus
nTPM: 52.1
2131 Male, age 76, both hemispheres 61.3
2100 Male, age 76, both hemispheres 60.9
2564 Male, age 74, both hemispheres 59.1
2805 Female, age 91, both hemispheres 53.1
2562 Male, age 61, both hemispheres 51.6
2376 Male, age 61, both hemispheres 47.5
2380 Male, age 80, both hemispheres 46.8
2808 Female, age 85, both hemispheres 44.4
2381 Male, age 80, both hemispheres 44.3
Nucleus gracilis
nTPM: 48.9
2627 Male, age 74, both hemispheres 51.8
2299 Female, age 85, both hemispheres 48.8
2382 Male, age 80, both hemispheres 46.1
Nucleus raphe magnus
nTPM: 54.0
2172 Female, age 85, both hemispheres 65.3
2455 Male, age 74, both hemispheres 54.6
2160 Male, age 61, both hemispheres 54.1
2051 Male, age 76, both hemispheres 51.7
2459 Female, age 91, both hemispheres 49.6
2328 Male, age 80, both hemispheres 48.9
Nucleus raphe obscurus
nTPM: 41.7
2800 Male, age 61, midline 44.9
2142 Male, age 76, midline 40.4
2845 Female, age 85, midline 39.8
Nucleus raphe pallidus
nTPM: 43.5
2183 Male, age 80, midline 46.4
1924 Male, age 61, midline 44.4
2145 Male, age 76, midline 39.7
Nucleus tractus solitarii
nTPM: 44.8
2656 Male, age 76, both hemispheres 49.1
2307 Male, age 80, both hemispheres 46.4
2191 Female, age 85, both hemispheres 44.6
2144 Female, age 91, right hemisphere 39.0
Paramedian reticular nucleus
nTPM: 44.7
2050 Female, age 85, both hemispheres 50.8
2057 Male, age 80, both hemispheres 46.0
2313 Male, age 61, both hemispheres 45.1
2052 Male, age 76, both hemispheres 36.9
Parvicellular reticular nuclei
nTPM: 50.9
2558 Male, age 74, both hemispheres 60.5
2119 Male, age 80, both hemispheres 47.3
2095 Male, age 76, both hemispheres 45.1
Parvicellular reticular nuclei, medullary
nTPM: 48.2
2181 Male, age 80, left hemisphere 51.0
2189 Female, age 91, both hemispheres 47.0
2091 Female, age 85, both hemispheres 46.6
Pedunculopontine tegmental nucleus
nTPM: 43.4
2334 Male, age 80, both hemispheres 43.8
1921 Female, age 85, both hemispheres 43.3
2338 Male, age 61, both hemispheres 43.2
Peritrigeminal nucleus
nTPM: 48.1
2136 Male, age 76, both hemispheres 49.0
2067 Female, age 85, both hemispheres 48.9
2179 Male, age 61, both hemispheres 46.6
Pontine nuclei
nTPM: 53.0
2787 Female, age 85, both hemispheres 66.1
1863 Male, age 55, unknown 60.9
2109 Female, age 72, unknown 54.9
1968 Male, age 76, left hemisphere 53.5
2115 Male, age 80, left hemisphere 52.7
2727 Male, age 61, right hemisphere 49.1
2319 Female, age 91, both hemispheres 44.9
2454 Male, age 74, left hemisphere 42.4
Pontine raphe nucleus
nTPM: 49.7
2122 Female, age 85, midline 50.3
2853 Male, age 76, midline 49.2
Posteroventral cochlear nucleus
nTPM: 43.2
2371 Male, age 61, both hemispheres 48.2
2752 Female, age 85, both hemispheres 45.4
2070 Male, age 76, both hemispheres 45.1
2341 Male, age 80, both hemispheres 41.1
2135 Female, age 91, both hemispheres 35.9
Prepositus hypoglossal nucleus
nTPM: 45.3
2086 Male, age 80, both hemispheres 47.7
2855 Female, age 85, right hemisphere 42.8
Principal sensory trigeminal nucleus
nTPM: 49.7
2158 Male, age 61, both hemispheres 53.8
2324 Male, age 76, both hemispheres 48.8
2008 Male, age 80, left hemisphere 48.7
2367 Female, age 91, left hemisphere 47.4
Reticular pontine nucleus, caudal
nTPM: 46.5
2332 Male, age 80, right hemisphere 53.2
2092 Male, age 76, both hemispheres 45.3
2457 Female, age 91, both hemispheres 44.0
2559 Male, age 74, both hemispheres 43.3
Reticular pontine nucleus, oral
nTPM: 45.2
2167 Male, age 76, both hemispheres 49.6
1939 Male, age 80, both hemispheres 48.2
2012 Female, age 85, both hemispheres 45.3
2361 Male, age 74, both hemispheres 43.7
2366 Female, age 91, both hemispheres 38.9
Reticulotegmental nucleus
nTPM: 47.8
2325 Male, age 76, both hemispheres 50.8
2452 Male, age 74, both hemispheres 49.1
2333 Male, age 80, both hemispheres 47.7
2322 Female, age 91, both hemispheres 43.7
Spinal trigeminal nucleus, caudal
nTPM: 49.8
2447 Male, age 76, both hemispheres 55.3
2642 Male, age 74, both hemispheres 50.6
2390 Female, age 91, both hemispheres 48.7
2308 Male, age 80, both hemispheres 47.5
2312 Male, age 61, both hemispheres 46.8
Spinal trigeminal nucleus, interpolar
nTPM: 50.5
2066 Male, age 76, right hemisphere 55.8
2033 Male, age 80, both hemispheres 50.9
2625 Male, age 61, both hemispheres 49.9
2386 Female, age 85, both hemispheres 49.7
2389 Female, age 91, both hemispheres 46.5
Spinal trigeminal nucleus, oral
nTPM: 45.6
2164 Male, age 80, both hemispheres 47.8
1978 Male, age 76, both hemispheres 45.6
2737 Female, age 85, both hemispheres 43.4
Spinal vestibular nucleus
nTPM: 45.8
2780 Male, age 80, both hemispheres 49.8
2796 Male, age 61, both hemispheres 48.3
2186 Female, age 91, both hemispheres 46.7
2748 Male, age 76, both hemispheres 44.5
2384 Male, age 74, both hemispheres 43.7
2806 Female, age 85, both hemispheres 42.0
Subcoeruleus area
nTPM: 46.8
2323 Female, age 91, left hemisphere 49.9
2089 Male, age 76, left hemisphere 48.7
2451 Male, age 74, both hemispheres 48.4
1958 Male, age 80, both hemispheres 47.1
2369 Female, age 85, left hemisphere 39.7
Superior olive
nTPM: 48.3
2561 Female, age 91, both hemispheres 51.3
1875 Female, age 85, both hemispheres 50.9
2329 Male, age 80, right hemisphere 50.3
2020 Male, age 76, both hemispheres 44.6
2364 Male, age 74, right hemisphere 44.5
Superior vestibular nucleus
nTPM: 43.7
2061 Male, age 76, both hemispheres 47.6
2015 Male, age 80, both hemispheres 46.2
2383 Male, age 74, both hemispheres 37.4
Ventral medullary reticular nucleus
nTPM: 47.1
2372 Male, age 61, both hemispheres 47.3
2060 Male, age 76, both hemispheres 47.0
Ventral periolivary nuclei
nTPM: 53.1
2130 Female, age 85, both hemispheres 65.0
2165 Male, age 80, both hemispheres 52.5
2794 Female, age 91, left hemisphere 51.7
2023 Male, age 76, both hemispheres 43.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 47.1
2118 Male, age 80, both hemispheres 49.4
2302 Female, age 91, both hemispheres 47.9
1986 Male, age 76, both hemispheres 47.2
2741 Female, age 85, both hemispheres 47.2
2180 Male, age 61, both hemispheres 43.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 50.3
2449 Male, age 74, both hemispheres 53.0
2359 Male, age 61, both hemispheres 52.3
2161 Male, age 80, both hemispheres 50.7
2840 Female, age 85, both hemispheres 50.7
2456 Female, age 91, both hemispheres 48.7
1959 Male, age 76, both hemispheres 46.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 31.8
FF:10165-103B3 76 years, female 36.4
FF:10182-103D2 60 years, female 27.2
Medulla oblongata
Scaled Tags Per Million: 38.8
FF:10038-101F2 18-64 years, mixed 51.7
FF:10155-103A2 76 years, female 36.8
FF:10174-103C3 60 years, female 28.0
Pons
Scaled Tags Per Million: 58.7
FF:10033-101E6 18-54 years, mixed 58.7

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 73.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 55.3
Samples: 4

Max nTPM: 61.8
Min nTPM: 48.4
Sample A Female 54.1
Sample B Female 56.9
Sample C Male 61.8
Sample D Male 48.4
Pons
nTPM: 73.1
Samples: 4

Max nTPM: 122.8
Min nTPM: 51.3
Sample A Female 122.8
Sample B Female 51.3
Sample C Male 55.9
Sample D Male 62.3

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 41.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 41.4
Samples: 4

Max nTPM: 43.3
Min nTPM: 38.8
Sample A Male 38.8
Sample B Male 43.0
Sample C Female 43.3
Sample D Female 40.3

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.5
72081906 Antisense, RP_051019_01_B07, Mouse strain C57BL/6J (56 days, male) 3.5
Pons
Expression energy: 3.6
72081906 Antisense, RP_051019_01_B07, Mouse strain C57BL/6J (56 days, male) 3.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org