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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
22.7
nTPM
Monaco:
215.4
nTPM
Schmiedel:
105.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.7
HPA sample
nTPM
gdT-cell nTPM: 15.4
Samples: 6
Max nTPM: 25.8
Min nTPM: 9.2
P10809_1007
15.0
P10809_1022
11.4
P10809_1041
9.2
P10809_1060
25.8
P10809_1077
20.8
P10809_1098
10.1
MAIT T-cell nTPM: 17.1
Samples: 6
Max nTPM: 29.1
Min nTPM: 7.7
P10809_1006
16.7
P10809_1024
15.1
P10809_1043
7.7
P10809_1062
29.1
P10809_1083
22.4
P10809_1097
11.6
Memory CD4 T-cell nTPM: 18.1
Samples: 6
Max nTPM: 27.5
Min nTPM: 10.2
P10809_1014
16.0
P10809_1026
14.9
P10809_1045
10.2
P10809_1064
27.5
P10809_1086
25.3
P10809_1113
14.4
Memory CD8 T-cell nTPM: 17.9
Samples: 5
Max nTPM: 29.6
Min nTPM: 7.2
P10809_1012
13.8
P10809_1027
21.0
P10809_1046
7.2
P10809_1065
29.6
P10809_1111
17.7
Naive CD4 T-cell nTPM: 22.7
Samples: 6
Max nTPM: 33.0
Min nTPM: 13.7
P10809_1015
33.0
P10809_1030
24.3
P10809_1049
13.7
P10809_1068
32.1
P10809_1085
13.9
P10809_1112
19.3
Naive CD8 T-cell nTPM: 21.8
Samples: 6
Max nTPM: 27.4
Min nTPM: 15.2
P10809_1016
26.1
P10809_1031
27.4
P10809_1050
15.2
P10809_1069
21.3
P10809_1087
22.0
P10809_1110
18.9
T-reg nTPM: 14.4
Samples: 6
Max nTPM: 23.9
Min nTPM: 0.6
P10809_1018
13.0
P10809_1037
23.9
P10809_1056
0.6
P10809_1075
21.1
P10809_1094
12.0
P10809_1106
15.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
215.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 215.4
Samples: 4
Max nTPM: 229.7
Min nTPM: 190.6
RHH5202_R3573
229.7
RHH5230_R3602
223.0
RHH5259_R3631
218.2
RHH5288_R3660
190.6
Effector memory CD8 T-cell nTPM: 157.4
Samples: 4
Max nTPM: 199.1
Min nTPM: 122.9
RHH5203_R3574
165.2
RHH5231_R3603
122.9
RHH5260_R3632
142.4
RHH5289_R3661
199.1
MAIT T-cell nTPM: 153.0
Samples: 4
Max nTPM: 172.3
Min nTPM: 133.3
RHH5233_R3605
172.3
RHH5205_R3576
139.2
RHH5262_R3634
167.2
RHH5297_R3663
133.3
Memory CD4 T-cell TFH nTPM: 214.0
Samples: 4
Max nTPM: 272.3
Min nTPM: 148.3
RHH5300_R3666
148.3
RHH5236_R3608
272.3
RHH5265_R3637
231.7
RHH5208_R3579
203.8
Memory CD4 T-cell Th1 nTPM: 183.8
Samples: 4
Max nTPM: 200.8
Min nTPM: 147.1
RHH5210_R3581
200.4
RHH5302_R3668
147.1
RHH5238_R3610
200.8
RHH5267_R3639
186.7
Memory CD4 T-cell Th1/Th17 nTPM: 171.9
Samples: 4
Max nTPM: 192.5
Min nTPM: 161.9
RHH5303_R3669
165.7
RHH5211_R3582
167.3
RHH5239_R3611
192.5
RHH5268_R3640
161.9
Memory CD4 T-cell Th17 nTPM: 171.5
Samples: 4
Max nTPM: 202.6
Min nTPM: 136.0
RHH5304_R3670
136.0
RHH5212_R3583
176.4
RHH5240_R3612
202.6
RHH5269_R3641
171.1
Memory CD4 T-cell Th2 nTPM: 176.1
Samples: 4
Max nTPM: 219.6
Min nTPM: 137.1
RHH5305_R3671
137.1
RHH5213_R3584
177.8
RHH5241_R3613
219.6
RHH5270_R3642
170.0
Naive CD4 T-cell nTPM: 196.0
Samples: 4
Max nTPM: 222.9
Min nTPM: 177.3
RHH5306_R3672
177.3
RHH5214_R3585
192.3
RHH5242_R3614
222.9
RHH5271_R3643
191.6
Naive CD8 T-cell nTPM: 204.7
Samples: 4
Max nTPM: 230.2
Min nTPM: 167.5
RHH5201_R3572
230.2
RHH5229_R3601
167.5
RHH5258_R3630
200.8
RHH5287_R3659
220.4
Non-Vd2 gdTCR nTPM: 145.5
Samples: 4
Max nTPM: 167.6
Min nTPM: 109.4
RHH5235_R3607
152.5
RHH5264_R3636
152.4
RHH5207_R3578
167.6
RHH5299_R3665
109.4
T-reg nTPM: 186.1
Samples: 4
Max nTPM: 232.9
Min nTPM: 149.8
RHH5301_R3667
149.8
RHH5237_R3609
232.9
RHH5266_R3638
176.9
RHH5209_R3580
184.6
Terminal effector memory CD4 T-cell nTPM: 171.9
Samples: 2
Max nTPM: 178.6
Min nTPM: 165.1
RHH5243_R3615
178.6
RHH5272_R3644
165.1
Terminal effector memory CD8 T-cell nTPM: 130.4
Samples: 4
Max nTPM: 148.1
Min nTPM: 115.1
RHH5232_R3604
125.1
RHH5204_R3575
148.1
RHH5261_R3633
115.1
RHH5296_R3662
133.2
Vd2 gdTCR nTPM: 169.1
Samples: 4
Max nTPM: 186.7
Min nTPM: 159.6
RHH5234_R3606
164.4
RHH5206_R3577
159.6
RHH5263_R3635
186.7
RHH5298_R3664
165.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
