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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
91.8
nTPM
HPA Brain:
115.8
nTPM
GTEx:
91.8
nTPM
FANTOM5:
69.0
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA018267
Glial cells
Not detected
Neuronal cells
Medium
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
115.8
Sample id
Sample description
nTPM
Hippocampus nTPM: 115.8
2148
Female, age 91, left hemisphere
129.4
2529
Female, age 94, left hemisphere
125.2
1911
Female, age 85, right hemisphere
114.7
2621
Female, age 67, right hemisphere
112.8
1855
Male, age 76, left hemisphere
109.8
1898
Male, age 80, left hemisphere
103.0
Dentate gyrus nTPM: 111.4
2528
Male, age 74, both hemispheres
129.9
2531
Female, age 67, both hemispheres
118.2
1927
Female, age 91, both hemispheres
113.6
2530
Female, age 94, left hemisphere
108.8
2010
Male, age 76, both hemispheres
107.7
2246
Female, age 85, both hemispheres
90.1
Entorhinal gyrus nTPM: 95.7
2613
Female, age 94, left hemisphere
113.0
2764
Male, age 80, right hemisphere
97.5
2686
Male, age 75, right hemisphere
95.9
1787
Male, age 76, left hemisphere
93.5
2117
Female, age 91, right hemisphere
87.1
1938
Female, age 85, left hemisphere
87.0
Hippocampus, CA1 nTPM: 114.7
2527
Male, age 74, both hemispheres
139.5
1873
Female, age 85, both hemispheres
126.5
2749
Male, age 80, left hemisphere
124.9
2045
Male, age 76, both hemispheres
99.8
2082
Female, age 91, right hemisphere
82.8
Hippocampus, CA2 nTPM: 108.6
1963
Male, age 80, left hemisphere
178.4
2249
Male, age 74, both hemispheres
106.3
2437
Female, age 94, left hemisphere
105.2
2113
Female, age 91, right hemisphere
99.2
1892
Male, age 76, both hemispheres
87.3
1940
Female, age 85, left hemisphere
75.0
Hippocampus, CA3 nTPM: 115.7
2620
Female, age 94, left hemisphere
162.9
2861
Female, age 67, both hemispheres
123.2
2137
Male, age 80, left hemisphere
111.9
2436
Male, age 74, both hemispheres
109.2
1891
Female, age 85, both hemispheres
102.2
1867
Male, age 76, both hemispheres
85.1
Parahippocampal cortex nTPM: 88.1
2622
Female, age 67, right hemisphere
105.4
2245
Female, age 91, both hemispheres
103.9
2692
Male, age 74, both hemispheres
98.9
1933
Female, age 85, both hemispheres
86.1
1990
Female, age 91, right hemisphere
85.1
2532
Female, age 72, left hemisphere
85.0
1850
Male, age 80, both hemispheres
82.1
2250
Female, age 67, right hemisphere
82.0
2693
Female, age 94, both hemispheres
77.1
2018
Male, age 76, both hemispheres
75.2
Perirhinal gyrus nTPM: 81.9
2521
Female, age 94, right hemisphere
92.0
1847
Female, age 91, left hemisphere
90.6
1794
Male, age 80, right hemisphere
79.6
1841
Female, age 85, right hemisphere
74.6
2848
Male, age 76, right hemisphere
72.9
Subiculum nTPM: 91.6
2619
Male, age 74, both hemispheres
118.4
2729
Female, age 91, right hemisphere
108.3
1901
Male, age 80, both hemispheres
88.5
1977
Female, age 85, both hemispheres
81.8
2042
Male, age 76, both hemispheres
76.9
2438
Female, age 94, left hemisphere
75.8
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
91.8
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 91.8
Samples: 197
Max nTPM: 214.6
Min nTPM: 11.8
Std nTPM: 40.9
Median nTPM: 90.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
214.6
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
208.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
203.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
192.1
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
181.3
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
176.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
175.4
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
168.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
165.4
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
163.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
161.7
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
157.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
155.2
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
155.1
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
153.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
150.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
150.2
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
148.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
148.2
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
146.5
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
145.3
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
143.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
142.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
142.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
142.1
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
142.0
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
140.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
140.2
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
136.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
136.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
135.6
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
134.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
133.5
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
133.2
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
129.0
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
126.6
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
125.7
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
124.9
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
124.9
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
124.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
123.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
122.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
121.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
120.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
120.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
119.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
118.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
118.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
117.4
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
117.0
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
116.9
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
116.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
116.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
116.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
114.6
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
114.5
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
114.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
113.9
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
113.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
113.3
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
112.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
112.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
111.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
110.5
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
109.4
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
108.7
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
108.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
108.0
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
107.7
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
107.0
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
106.8
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
106.1
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
104.6
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
104.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
104.1
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
103.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
103.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
102.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
100.9
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
100.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
100.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
100.7
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
100.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
98.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
97.9
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
97.9
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
96.9
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
96.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
95.9
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
95.7
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
94.9
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
93.7
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
93.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
93.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
92.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
92.0
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
92.0
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
92.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
90.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
89.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
88.7
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
88.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
87.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
87.2
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
87.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
85.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
84.9
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
84.8
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
84.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
83.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
81.3
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
80.2
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
80.0
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
79.8
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
79.3
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
78.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
78.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
78.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
76.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
76.7
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
76.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
76.0
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
75.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
73.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
73.4
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
72.8
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
72.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
70.5
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
69.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
69.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
68.4
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
68.3
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
67.8
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
66.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
66.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
66.3
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
66.3
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
66.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
64.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
63.7
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
63.7
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
63.2
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
62.4
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
61.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
61.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
60.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
59.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
59.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
58.6
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
58.3
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
56.1
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
55.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
55.7
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
55.6
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
55.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
54.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
54.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
53.7
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
53.5
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
53.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
52.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
51.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
50.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
49.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
48.4
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
48.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
47.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
46.9
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
46.9
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
46.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
46.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
45.8
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
45.0
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
44.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
44.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
43.4
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
43.2
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
42.9
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
39.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
38.9
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
38.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
37.9
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
36.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
35.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
34.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
34.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
33.5
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
33.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
32.9
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
31.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
30.4
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
27.6
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
26.5
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
22.5
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
16.0
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
12.8
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
11.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.