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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
48.1
nTPM
GTEx:
48.1
nTPM
FANTOM5:
30.2
Scaled Tags Per Million
Pig:
22.4
nTPM
Mouse:
18.5
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
48.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 48.1
Samples: 105
Max nTPM: 83.1
Min nTPM: 24.2
Std nTPM: 11.5
Median nTPM:
490_1
67 years, female
83.1
149_1
88 years, male
78.4
89_1
63 years, male
78.2
137_1
83 years, male
69.3
499_1
55 years, female
67.3
217_1
76 years, male
66.8
2_1
77 years, female
65.7
32_1
67 years, male
64.8
468_1
89 years, male
64.5
495_1
57 years, female
64.0
162_1
79 years, female
63.8
414_1
84 years, female
63.6
126_1
63 years, male
63.5
115_1
83 years, male
62.1
142_1
61 years, female
61.9
415_1
77 years, female
60.7
9_1
66 years, female
59.7
389_1
86 years, female
59.3
117_1
61 years, male
59.2
43_1
64 years, female
58.8
139_1
64 years, female
58.8
466_1
57 years, female
58.6
517_1
88 years, male
56.3
153_1
70 years, female
56.0
413_1
59 years, female
55.8
35_1
74 years, female
55.5
42_1
85 years, male
55.4
324_1
76 years, male
54.9
119_1
70 years, female
54.6
286_1
68 years, female
53.9
251_1
78 years, male
53.6
503_1
68 years, male
53.5
315_1
62 years, female
53.2
81_1
67 years, male
52.9
347_1
72 years, male
52.7
313_1
79 years, female
52.3
491_1
89 years, female
52.0
526_1
61 years, male
51.7
109_1
81 years, female
51.2
246_1
77 years, male
51.1
311_1
78 years, male
51.0
18_1
88 years, male
50.9
265_1
87 years, male
50.3
293_1
68 years, female
50.0
266_1
85 years, male
49.7
254_1
77 years, female
48.8
394_1
75 years, female
48.6
99_1
64 years, male
47.8
404_1
82 years, female
47.8
307_1
66 years, female
47.5
314_1
67 years, male
47.2
292_1
71 years, male
46.9
145_1
84 years, male
46.8
319_1
81 years, male
46.7
291_1
76 years, male
46.5
447_1
81 years, male
46.1
288_1
66 years, female
46.0
350_1
84 years, female
45.6
425_1
59 years, female
45.1
396_1
62 years, male
44.7
321_1
62 years, female
44.6
17_1
71 years, male
44.3
406_1
79 years, male
44.3
518_1
75 years, female
44.3
120_1
70 years, female
44.1
348_1
84 years, male
44.1
501_1
88 years, male
44.1
172_1
72 years, female
43.2
335_1
73 years, female
43.2
355_1
70 years, female
43.1
6_1
73 years, female
43.0
376_1
75 years, female
42.0
352_1
62 years, male
41.2
243_1
75 years, male
40.9
189_1
76 years, male
40.5
354_1
81 years, female
40.5
356_1
87 years, female
40.4
237_1
82 years, male
40.3
318_1
68 years, male
40.2
229_1
69 years, female
40.0
375_1
74 years, female
39.5
384_1
83 years, male
39.3
320_1
89 years, female
38.3
349_1
83 years, male
38.3
405_1
91 years, male
38.3
316_1
62 years, male
37.6
4_1
88 years, female
36.2
480_1
63 years, male
36.2
308_1
70 years, female
35.8
264_1
73 years, female
35.6
506_1
65 years, male
35.2
377_1
82 years, female
34.9
317_1
60 years, male
34.7
163_1
78 years, male
34.1
177_1
74 years, male
33.7
41_1
94 years, female
33.5
386_1
76 years, male
33.4
351_1
91 years, male
33.2
353_1
82 years, female
31.8
295_1
61 years, female
31.2
173_1
67 years, male
30.4
322_1
76 years, male
30.0
379_1
60 years, male
27.4
218_1
71 years, female
25.8
452_1
88 years, female
24.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
