HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:29.3 nTPM
HPA Brain:27.9 nTPM
GTEx:29.3 nTPM
FANTOM5:30.6 Scaled Tags Per Million
Pig:30.0 nTPM
Mouse:33.0 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006232
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
1855 Male, age 76, left hemisphere 28.3
1898 Male, age 80, left hemisphere 28.1
2148 Female, age 91, left hemisphere 27.2
2529 Female, age 94, left hemisphere 24.9
1911 Female, age 85, right hemisphere 24.8
2621 Female, age 67, right hemisphere 22.8
Dentate gyrus
nTPM: 25.3
2531 Female, age 67, both hemispheres 28.5
2010 Male, age 76, both hemispheres 27.9
1927 Female, age 91, both hemispheres 26.1
2530 Female, age 94, left hemisphere 25.0
2528 Male, age 74, both hemispheres 22.7
2246 Female, age 85, both hemispheres 22.0
Entorhinal gyrus
nTPM: 23.3
1938 Female, age 85, left hemisphere 24.9
2117 Female, age 91, right hemisphere 24.5
2764 Male, age 80, right hemisphere 23.1
1787 Male, age 76, left hemisphere 22.5
2613 Female, age 94, left hemisphere 22.5
2686 Male, age 75, right hemisphere 22.5
Hippocampus, CA1
nTPM: 27.6
2749 Male, age 80, left hemisphere 33.5
1873 Female, age 85, both hemispheres 29.3
2045 Male, age 76, both hemispheres 29.2
2527 Male, age 74, both hemispheres 24.4
2082 Female, age 91, right hemisphere 21.7
Hippocampus, CA2
nTPM: 24.7
1892 Male, age 76, both hemispheres 30.6
1963 Male, age 80, left hemisphere 26.6
1940 Female, age 85, left hemisphere 23.7
2249 Male, age 74, both hemispheres 23.0
2113 Female, age 91, right hemisphere 22.8
2437 Female, age 94, left hemisphere 21.7
Hippocampus, CA3
nTPM: 26.8
2137 Male, age 80, left hemisphere 30.8
1867 Male, age 76, both hemispheres 29.2
1891 Female, age 85, both hemispheres 27.1
2620 Female, age 94, left hemisphere 25.4
2436 Male, age 74, both hemispheres 24.8
2861 Female, age 67, both hemispheres 23.2
Parahippocampal cortex
nTPM: 25.4
1850 Male, age 80, both hemispheres 31.2
2018 Male, age 76, both hemispheres 27.6
2693 Female, age 94, both hemispheres 26.2
1933 Female, age 85, both hemispheres 25.7
2245 Female, age 91, both hemispheres 24.9
2532 Female, age 72, left hemisphere 24.7
1990 Female, age 91, right hemisphere 24.6
2250 Female, age 67, right hemisphere 24.0
2622 Female, age 67, right hemisphere 23.2
2692 Male, age 74, both hemispheres 22.2
Perirhinal gyrus
nTPM: 27.9
1841 Female, age 85, right hemisphere 30.8
1847 Female, age 91, left hemisphere 29.3
1794 Male, age 80, right hemisphere 28.2
2848 Male, age 76, right hemisphere 25.7
2521 Female, age 94, right hemisphere 25.4
Subiculum
nTPM: 24.9
1901 Male, age 80, both hemispheres 29.1
2438 Female, age 94, left hemisphere 27.9
2042 Male, age 76, both hemispheres 25.5
2729 Female, age 91, right hemisphere 24.0
1977 Female, age 85, both hemispheres 23.0
2619 Male, age 74, both hemispheres 20.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.3
Samples: 197

Max nTPM: 45.9
Min nTPM: 13.6
Std nTPM: 5.1
Median nTPM: 29.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 45.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 39.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 39.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 39.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 39.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 38.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 38.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 37.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 37.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 37.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.6
FF:10153-102I9 76 years, female 35.3
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.0
Pig sample Sample description nTPM
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 36.2
Min nTPM: 23.5
Sample A Female 36.2
Sample B Female 23.5
Sample C Male 24.6
Sample D Male 25.6
Dorsal hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 35.0
Min nTPM: 27.6
Sample A Female 35.0
Sample B Female 27.6
Sample C Male 29.1
Sample D Male 28.0
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 29.5
Min nTPM: 24.7
Sample A Female 28.7
Sample B Female 29.5
Sample C Male 24.7
Sample D Male 25.5
Ventral hippocampus
nTPM: 27.1
Samples: 4

Max nTPM: 30.8
Min nTPM: 22.4
Sample A Female 30.6
Sample B Female 24.7
Sample C Male 22.4
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.8
Samples: 4

Max nTPM: 31.3
Min nTPM: 26.1
Sample A Male 26.1
Sample B Male 31.3
Sample C Female 30.0
Sample D Female 27.7
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 37.1
Min nTPM: 30.7
Sample A Male 30.7
Sample B Male 31.6
Sample C Female 37.1
Sample D Female 32.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
71612184 Antisense, RP_050927_02_C09, Mouse strain C57BL/6J (56 days, male) 1.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org