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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
102.0
nTPM
Monaco:
173.8
nTPM
Schmiedel:
108.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.0
HPA sample
nTPM
gdT-cell nTPM: 74.8
Samples: 6
Max nTPM: 86.1
Min nTPM: 53.5
P10809_1007
53.5
P10809_1022
78.3
P10809_1041
70.5
P10809_1060
83.4
P10809_1077
86.1
P10809_1098
76.7
MAIT T-cell nTPM: 82.8
Samples: 6
Max nTPM: 113.5
Min nTPM: 64.9
P10809_1006
64.9
P10809_1024
85.5
P10809_1043
70.8
P10809_1062
82.5
P10809_1083
113.5
P10809_1097
79.7
Memory CD4 T-cell nTPM: 84.5
Samples: 6
Max nTPM: 101.8
Min nTPM: 63.1
P10809_1014
63.1
P10809_1026
85.3
P10809_1045
76.4
P10809_1064
94.8
P10809_1086
101.8
P10809_1113
85.8
Memory CD8 T-cell nTPM: 76.6
Samples: 5
Max nTPM: 86.4
Min nTPM: 58.0
P10809_1012
58.0
P10809_1027
83.2
P10809_1046
70.3
P10809_1065
86.4
P10809_1111
85.1
Naive CD4 T-cell nTPM: 80.7
Samples: 6
Max nTPM: 91.9
Min nTPM: 72.4
P10809_1015
72.4
P10809_1030
75.6
P10809_1049
78.8
P10809_1068
87.6
P10809_1085
91.9
P10809_1112
77.7
Naive CD8 T-cell nTPM: 77.3
Samples: 6
Max nTPM: 99.7
Min nTPM: 57.5
P10809_1016
57.5
P10809_1031
91.5
P10809_1050
68.0
P10809_1069
78.2
P10809_1087
99.7
P10809_1110
68.9
T-reg nTPM: 102.0
Samples: 6
Max nTPM: 121.6
Min nTPM: 71.5
P10809_1018
71.5
P10809_1037
121.6
P10809_1056
89.2
P10809_1075
112.6
P10809_1094
106.4
P10809_1106
110.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
173.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 134.6
Samples: 4
Max nTPM: 162.4
Min nTPM: 102.3
RHH5202_R3573
162.4
RHH5230_R3602
126.6
RHH5259_R3631
102.3
RHH5288_R3660
147.1
Effector memory CD8 T-cell nTPM: 168.9
Samples: 4
Max nTPM: 205.7
Min nTPM: 121.9
RHH5203_R3574
186.5
RHH5231_R3603
161.5
RHH5260_R3632
121.9
RHH5289_R3661
205.7
MAIT T-cell nTPM: 160.0
Samples: 4
Max nTPM: 169.5
Min nTPM: 146.2
RHH5233_R3605
169.5
RHH5205_R3576
146.2
RHH5262_R3634
158.6
RHH5297_R3663
165.8
Memory CD4 T-cell TFH nTPM: 169.3
Samples: 4
Max nTPM: 196.6
Min nTPM: 156.9
RHH5300_R3666
160.4
RHH5236_R3608
196.6
RHH5265_R3637
156.9
RHH5208_R3579
163.2
Memory CD4 T-cell Th1 nTPM: 138.7
Samples: 4
Max nTPM: 183.7
Min nTPM: 94.5
RHH5210_R3581
183.7
RHH5302_R3668
147.4
RHH5238_R3610
94.5
RHH5267_R3639
129.1
Memory CD4 T-cell Th1/Th17 nTPM: 138.6
Samples: 4
Max nTPM: 203.6
Min nTPM: 92.0
RHH5303_R3669
203.6
RHH5211_R3582
138.9
RHH5239_R3611
92.0
RHH5268_R3640
119.8
Memory CD4 T-cell Th17 nTPM: 149.2
Samples: 4
Max nTPM: 192.1
Min nTPM: 103.2
RHH5304_R3670
150.9
RHH5212_R3583
192.1
RHH5240_R3612
150.6
RHH5269_R3641
103.2
Memory CD4 T-cell Th2 nTPM: 160.6
Samples: 4
Max nTPM: 181.4
Min nTPM: 142.8
RHH5305_R3671
142.8
RHH5213_R3584
162.3
RHH5241_R3613
181.4
RHH5270_R3642
155.8
Naive CD4 T-cell nTPM: 153.5
Samples: 4
Max nTPM: 191.4
Min nTPM: 133.4
RHH5306_R3672
133.4
RHH5214_R3585
191.4
RHH5242_R3614
154.8
RHH5271_R3643
134.2
Naive CD8 T-cell nTPM: 156.3
Samples: 4
Max nTPM: 204.8
Min nTPM: 88.9
RHH5201_R3572
204.8
RHH5229_R3601
88.9
RHH5258_R3630
179.6
RHH5287_R3659
151.9
Non-Vd2 gdTCR nTPM: 165.4
Samples: 4
Max nTPM: 196.4
Min nTPM: 126.7
RHH5235_R3607
126.7
RHH5264_R3636
187.9
RHH5207_R3578
196.4
RHH5299_R3665
150.6
T-reg nTPM: 157.4
Samples: 4
Max nTPM: 205.4
Min nTPM: 127.0
RHH5301_R3667
138.1
RHH5237_R3609
205.4
RHH5266_R3638
127.0
RHH5209_R3580
159.2
Terminal effector memory CD4 T-cell nTPM: 173.8
Samples: 2
Max nTPM: 196.1
Min nTPM: 151.5
RHH5243_R3615
151.5
RHH5272_R3644
196.1
Terminal effector memory CD8 T-cell nTPM: 170.6
Samples: 4
Max nTPM: 200.3
Min nTPM: 119.7
RHH5232_R3604
187.9
RHH5204_R3575
200.3
RHH5261_R3633
119.7
RHH5296_R3662
174.5
Vd2 gdTCR nTPM: 146.2
Samples: 4
Max nTPM: 174.0
Min nTPM: 128.2
RHH5234_R3606
128.2
RHH5206_R3577
174.0
RHH5263_R3635
137.4
RHH5298_R3664
145.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
