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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
78.2
nTPM
Monaco:
130.5
nTPM
Schmiedel:
161.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.2
HPA sample
nTPM
gdT-cell nTPM: 42.4
Samples: 6
Max nTPM: 53.2
Min nTPM: 34.5
P10809_1007
38.4
P10809_1022
53.2
P10809_1041
34.5
P10809_1060
45.5
P10809_1077
38.0
P10809_1098
44.9
MAIT T-cell nTPM: 49.2
Samples: 6
Max nTPM: 59.8
Min nTPM: 41.7
P10809_1006
50.6
P10809_1024
59.8
P10809_1043
42.1
P10809_1062
53.1
P10809_1083
41.7
P10809_1097
48.0
Memory CD4 T-cell nTPM: 53.8
Samples: 6
Max nTPM: 63.7
Min nTPM: 47.0
P10809_1014
50.2
P10809_1026
47.0
P10809_1045
50.8
P10809_1064
50.2
P10809_1086
63.7
P10809_1113
61.0
Memory CD8 T-cell nTPM: 50.6
Samples: 5
Max nTPM: 56.8
Min nTPM: 41.1
P10809_1012
47.7
P10809_1027
53.5
P10809_1046
41.1
P10809_1065
56.8
P10809_1111
54.0
Naive CD4 T-cell nTPM: 43.2
Samples: 6
Max nTPM: 54.8
Min nTPM: 33.5
P10809_1015
44.6
P10809_1030
39.8
P10809_1049
33.5
P10809_1068
41.8
P10809_1085
54.8
P10809_1112
44.9
Naive CD8 T-cell nTPM: 48.7
Samples: 6
Max nTPM: 69.8
Min nTPM: 32.9
P10809_1016
32.9
P10809_1031
69.8
P10809_1050
40.8
P10809_1069
44.8
P10809_1087
58.7
P10809_1110
45.4
T-reg nTPM: 78.3
Samples: 6
Max nTPM: 96.0
Min nTPM: 62.1
P10809_1018
62.1
P10809_1037
63.7
P10809_1056
79.1
P10809_1075
85.1
P10809_1094
83.5
P10809_1106
96.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 105.7
Samples: 4
Max nTPM: 148.8
Min nTPM: 73.3
RHH5202_R3573
148.8
RHH5230_R3602
73.3
RHH5259_R3631
95.4
RHH5288_R3660
105.4
Effector memory CD8 T-cell nTPM: 122.1
Samples: 4
Max nTPM: 204.2
Min nTPM: 73.8
RHH5203_R3574
204.2
RHH5231_R3603
114.0
RHH5260_R3632
73.8
RHH5289_R3661
96.2
MAIT T-cell nTPM: 108.8
Samples: 4
Max nTPM: 117.7
Min nTPM: 100.4
RHH5233_R3605
100.4
RHH5205_R3576
109.9
RHH5262_R3634
107.1
RHH5297_R3663
117.7
Memory CD4 T-cell TFH nTPM: 108.3
Samples: 4
Max nTPM: 129.0
Min nTPM: 96.4
RHH5300_R3666
96.4
RHH5236_R3608
101.8
RHH5265_R3637
129.0
RHH5208_R3579
106.1
Memory CD4 T-cell Th1 nTPM: 100.0
Samples: 4
Max nTPM: 121.7
Min nTPM: 80.1
RHH5210_R3581
121.7
RHH5302_R3668
100.6
RHH5238_R3610
97.5
RHH5267_R3639
80.1
Memory CD4 T-cell Th1/Th17 nTPM: 108.6
Samples: 4
Max nTPM: 172.4
Min nTPM: 70.8
RHH5303_R3669
100.5
RHH5211_R3582
172.4
RHH5239_R3611
70.8
RHH5268_R3640
90.5
Memory CD4 T-cell Th17 nTPM: 119.9
Samples: 4
Max nTPM: 178.1
Min nTPM: 77.7
RHH5304_R3670
121.6
RHH5212_R3583
178.1
RHH5240_R3612
102.2
RHH5269_R3641
77.7
Memory CD4 T-cell Th2 nTPM: 124.6
Samples: 4
Max nTPM: 171.1
Min nTPM: 106.4
RHH5305_R3671
108.2
RHH5213_R3584
171.1
RHH5241_R3613
112.5
RHH5270_R3642
106.4
Naive CD4 T-cell nTPM: 108.7
Samples: 4
Max nTPM: 141.2
Min nTPM: 92.9
RHH5306_R3672
102.9
RHH5214_R3585
141.2
RHH5242_R3614
97.9
RHH5271_R3643
92.9
Naive CD8 T-cell nTPM: 82.3
Samples: 4
Max nTPM: 114.6
Min nTPM: 50.6
RHH5201_R3572
68.7
RHH5229_R3601
50.6
RHH5258_R3630
114.6
RHH5287_R3659
95.2
Non-Vd2 gdTCR nTPM: 105.4
Samples: 4
Max nTPM: 118.4
Min nTPM: 69.8
RHH5235_R3607
69.8
RHH5264_R3636
118.4
RHH5207_R3578
118.4
RHH5299_R3665
115.0
T-reg nTPM: 130.5
Samples: 4
Max nTPM: 173.7
Min nTPM: 89.5
RHH5301_R3667
134.6
RHH5237_R3609
124.0
RHH5266_R3638
89.5
RHH5209_R3580
173.7
Terminal effector memory CD4 T-cell nTPM: 93.3
Samples: 2
Max nTPM: 100.2
Min nTPM: 86.4
RHH5243_R3615
86.4
RHH5272_R3644
100.2
Terminal effector memory CD8 T-cell nTPM: 124.8
Samples: 4
Max nTPM: 153.7
Min nTPM: 95.5
RHH5232_R3604
135.9
RHH5204_R3575
153.7
RHH5261_R3633
95.5
RHH5296_R3662
114.1
Vd2 gdTCR nTPM: 115.3
Samples: 4
Max nTPM: 144.7
Min nTPM: 97.4
RHH5234_R3606
97.4
RHH5206_R3577
144.7
RHH5263_R3635
113.5
RHH5298_R3664
105.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
