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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
87.8
nTPM
Monaco:
189.0
nTPM
Schmiedel:
7.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.8
HPA sample
nTPM
gdT-cell nTPM: 87.8
Samples: 6
Max nTPM: 110.4
Min nTPM: 62.7
P10809_1007
88.2
P10809_1022
95.9
P10809_1041
110.4
P10809_1060
62.7
P10809_1077
79.7
P10809_1098
90.1
MAIT T-cell nTPM: 54.5
Samples: 6
Max nTPM: 77.2
Min nTPM: 43.3
P10809_1006
45.8
P10809_1024
48.8
P10809_1043
64.4
P10809_1062
47.2
P10809_1083
43.3
P10809_1097
77.2
Memory CD4 T-cell nTPM: 30.1
Samples: 6
Max nTPM: 53.2
Min nTPM: 18.4
P10809_1014
18.4
P10809_1026
24.1
P10809_1045
26.2
P10809_1064
53.2
P10809_1086
39.6
P10809_1113
19.3
Memory CD8 T-cell nTPM: 71.4
Samples: 5
Max nTPM: 98.9
Min nTPM: 52.1
P10809_1012
52.1
P10809_1027
63.1
P10809_1046
75.2
P10809_1065
98.9
P10809_1111
67.8
Naive CD4 T-cell nTPM: 12.6
Samples: 6
Max nTPM: 22.2
Min nTPM: 7.3
P10809_1015
7.3
P10809_1030
13.6
P10809_1049
13.1
P10809_1068
8.3
P10809_1085
22.2
P10809_1112
11.1
Naive CD8 T-cell nTPM: 37.9
Samples: 6
Max nTPM: 69.4
Min nTPM: 14.7
P10809_1016
14.7
P10809_1031
20.1
P10809_1050
42.3
P10809_1069
69.4
P10809_1087
54.9
P10809_1110
25.7
T-reg nTPM: 33.1
Samples: 6
Max nTPM: 43.2
Min nTPM: 27.0
P10809_1018
27.0
P10809_1037
29.7
P10809_1056
43.2
P10809_1075
30.0
P10809_1094
32.3
P10809_1106
36.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
189.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 54.1
Samples: 4
Max nTPM: 61.6
Min nTPM: 44.7
RHH5202_R3573
44.7
RHH5230_R3602
61.6
RHH5259_R3631
51.4
RHH5288_R3660
58.8
Effector memory CD8 T-cell nTPM: 172.4
Samples: 4
Max nTPM: 217.8
Min nTPM: 132.4
RHH5203_R3574
172.3
RHH5231_R3603
217.8
RHH5260_R3632
167.0
RHH5289_R3661
132.4
MAIT T-cell nTPM: 111.1
Samples: 4
Max nTPM: 125.3
Min nTPM: 87.2
RHH5233_R3605
87.2
RHH5205_R3576
118.9
RHH5262_R3634
112.9
RHH5297_R3663
125.3
Memory CD4 T-cell TFH nTPM: 27.6
Samples: 4
Max nTPM: 32.1
Min nTPM: 20.3
RHH5300_R3666
29.4
RHH5236_R3608
32.1
RHH5265_R3637
28.7
RHH5208_R3579
20.3
Memory CD4 T-cell Th1 nTPM: 47.4
Samples: 4
Max nTPM: 53.1
Min nTPM: 39.8
RHH5210_R3581
51.8
RHH5302_R3668
39.8
RHH5238_R3610
44.9
RHH5267_R3639
53.1
Memory CD4 T-cell Th1/Th17 nTPM: 45.3
Samples: 4
Max nTPM: 59.4
Min nTPM: 25.9
RHH5303_R3669
46.3
RHH5211_R3582
59.4
RHH5239_R3611
25.9
RHH5268_R3640
49.7
Memory CD4 T-cell Th17 nTPM: 39.1
Samples: 4
Max nTPM: 52.8
Min nTPM: 20.5
RHH5304_R3670
52.8
RHH5212_R3583
44.5
RHH5240_R3612
20.5
RHH5269_R3641
38.4
Memory CD4 T-cell Th2 nTPM: 49.2
Samples: 4
Max nTPM: 69.4
Min nTPM: 16.7
RHH5305_R3671
54.2
RHH5213_R3584
69.4
RHH5241_R3613
16.7
RHH5270_R3642
56.4
Naive CD4 T-cell nTPM: 19.4
Samples: 4
Max nTPM: 27.4
Min nTPM: 13.3
RHH5306_R3672
13.3
RHH5214_R3585
27.4
RHH5242_R3614
18.4
RHH5271_R3643
18.5
Naive CD8 T-cell nTPM: 21.5
Samples: 4
Max nTPM: 31.5
Min nTPM: 4.4
RHH5201_R3572
4.4
RHH5229_R3601
20.3
RHH5258_R3630
31.5
RHH5287_R3659
29.9
Non-Vd2 gdTCR nTPM: 189.0
Samples: 4
Max nTPM: 220.2
Min nTPM: 158.8
RHH5235_R3607
158.8
RHH5264_R3636
162.1
RHH5207_R3578
220.2
RHH5299_R3665
214.8
T-reg nTPM: 35.0
Samples: 4
Max nTPM: 39.3
Min nTPM: 31.9
RHH5301_R3667
39.3
RHH5237_R3609
31.9
RHH5266_R3638
32.1
RHH5209_R3580
36.5
Terminal effector memory CD4 T-cell nTPM: 147.7
Samples: 2
Max nTPM: 152.9
Min nTPM: 142.4
RHH5243_R3615
152.9
RHH5272_R3644
142.4
Terminal effector memory CD8 T-cell nTPM: 163.7
Samples: 4
Max nTPM: 186.7
Min nTPM: 136.3
RHH5232_R3604
186.7
RHH5204_R3575
152.6
RHH5261_R3633
179.2
RHH5296_R3662
136.3
Vd2 gdTCR nTPM: 168.1
Samples: 4
Max nTPM: 229.5
Min nTPM: 137.5
RHH5234_R3606
137.5
RHH5206_R3577
229.5
RHH5263_R3635
149.7
RHH5298_R3664
155.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
