HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:47.7 nTPM
HPA Brain:122.7 nTPM
GTEx:47.7 nTPM
FANTOM5:161.3 Scaled Tags Per Million
Pig:100.0 nTPM
Mouse:96.8 nTPM
Allen mouse:12.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057821Antibody HPA076772
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 122.7
Sample id Sample description nTPM
Hippocampus
nTPM: 93.8
1898 Male, age 80, left hemisphere 111.4
1911 Female, age 85, right hemisphere 110.1
1855 Male, age 76, left hemisphere 107.4
2621 Female, age 67, right hemisphere 93.6
2148 Female, age 91, left hemisphere 70.8
2529 Female, age 94, left hemisphere 69.4
Dentate gyrus
nTPM: 96.8
2530 Female, age 94, left hemisphere 125.7
2010 Male, age 76, both hemispheres 116.6
1927 Female, age 91, both hemispheres 98.4
2531 Female, age 67, both hemispheres 82.3
2246 Female, age 85, both hemispheres 81.7
2528 Male, age 74, both hemispheres 76.1
Entorhinal gyrus
nTPM: 86.1
2764 Male, age 80, right hemisphere 106.7
2117 Female, age 91, right hemisphere 93.5
1787 Male, age 76, left hemisphere 87.4
1938 Female, age 85, left hemisphere 85.3
2613 Female, age 94, left hemisphere 82.3
2686 Male, age 75, right hemisphere 61.3
Hippocampus, CA1
nTPM: 122.7
2749 Male, age 80, left hemisphere 251.9
1873 Female, age 85, both hemispheres 108.0
2045 Male, age 76, both hemispheres 106.0
2527 Male, age 74, both hemispheres 78.5
2082 Female, age 91, right hemisphere 69.2
Hippocampus, CA2
nTPM: 98.8
1963 Male, age 80, left hemisphere 139.8
1892 Male, age 76, both hemispheres 114.2
2249 Male, age 74, both hemispheres 91.5
1940 Female, age 85, left hemisphere 88.2
2437 Female, age 94, left hemisphere 82.3
2113 Female, age 91, right hemisphere 76.8
Hippocampus, CA3
nTPM: 104.8
2137 Male, age 80, left hemisphere 204.9
1867 Male, age 76, both hemispheres 115.1
1891 Female, age 85, both hemispheres 111.2
2620 Female, age 94, left hemisphere 71.6
2436 Male, age 74, both hemispheres 65.3
2861 Female, age 67, both hemispheres 60.6
Parahippocampal cortex
nTPM: 84.7
1850 Male, age 80, both hemispheres 109.8
2532 Female, age 72, left hemisphere 102.1
1933 Female, age 85, both hemispheres 95.7
2693 Female, age 94, both hemispheres 92.8
2018 Male, age 76, both hemispheres 90.2
2245 Female, age 91, both hemispheres 87.5
1990 Female, age 91, right hemisphere 86.4
2692 Male, age 74, both hemispheres 71.0
2250 Female, age 67, right hemisphere 62.7
2622 Female, age 67, right hemisphere 48.6
Perirhinal gyrus
nTPM: 95.2
2521 Female, age 94, right hemisphere 112.0
1794 Male, age 80, right hemisphere 101.5
2848 Male, age 76, right hemisphere 92.6
1841 Female, age 85, right hemisphere 90.7
1847 Female, age 91, left hemisphere 79.4
Subiculum
nTPM: 107.2
1901 Male, age 80, both hemispheres 164.1
2042 Male, age 76, both hemispheres 137.7
1977 Female, age 85, both hemispheres 113.1
2438 Female, age 94, left hemisphere 96.2
2729 Female, age 91, right hemisphere 68.9
2619 Male, age 74, both hemispheres 63.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.7
Samples: 197

Max nTPM: 121.1
Min nTPM: 8.3
Std nTPM: 21.0
Median nTPM: 44.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 121.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 105.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 101.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 99.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 97.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 96.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 94.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 93.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 93.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 92.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 90.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 161.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 161.3
FF:10169-103B7 60 years, female 177.5
FF:10153-102I9 76 years, female 145.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 100.0
Pig sample Sample description nTPM
Subiculum
nTPM: 67.6
Samples: 4

Max nTPM: 76.4
Min nTPM: 58.5
Sample A Female 76.4
Sample B Female 68.4
Sample C Male 58.5
Sample D Male 66.9
Dorsal hippocampus
nTPM: 100.0
Samples: 4

Max nTPM: 131.5
Min nTPM: 68.0
Sample A Female 131.5
Sample B Female 85.2
Sample C Male 115.2
Sample D Male 68.0
Entorhinal cortex
nTPM: 89.4
Samples: 4

Max nTPM: 99.4
Min nTPM: 76.1
Sample A Female 93.2
Sample B Female 99.4
Sample C Male 76.1
Sample D Male 89.0
Ventral hippocampus
nTPM: 72.5
Samples: 4

Max nTPM: 88.5
Min nTPM: 54.0
Sample A Female 76.6
Sample B Female 54.0
Sample C Male 70.7
Sample D Male 88.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 96.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.9
Samples: 4

Max nTPM: 75.1
Min nTPM: 58.2
Sample A Male 61.1
Sample B Male 58.2
Sample C Female 65.1
Sample D Female 75.1
Hippocampal formation
nTPM: 96.8
Samples: 4

Max nTPM: 108.0
Min nTPM: 77.6
Sample A Male 94.9
Sample B Male 106.7
Sample C Female 108.0
Sample D Female 77.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.6
69012789 Antisense, RP_050309_01_E03, Mouse strain C57BL/6J (56 days, male) 12.6
70301084 Antisense, RP_050309_01_E03, Mouse strain C57BL/6J (56 days, male) 8.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org