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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
50.3
nTPM
Monaco:
36.8
nTPM
Schmiedel:
88.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
50.3
HPA sample
nTPM
gdT-cell nTPM: 24.5
Samples: 6
Max nTPM: 44.8
Min nTPM: 12.4
P10809_1007
44.8
P10809_1022
17.0
P10809_1041
27.5
P10809_1060
12.4
P10809_1077
28.8
P10809_1098
16.3
MAIT T-cell nTPM: 15.7
Samples: 6
Max nTPM: 30.5
Min nTPM: 5.1
P10809_1006
20.0
P10809_1024
8.1
P10809_1043
15.4
P10809_1062
5.1
P10809_1083
14.9
P10809_1097
30.5
Memory CD4 T-cell nTPM: 28.1
Samples: 6
Max nTPM: 39.3
Min nTPM: 13.2
P10809_1014
35.1
P10809_1026
33.7
P10809_1045
33.1
P10809_1064
39.3
P10809_1086
13.2
P10809_1113
14.0
Memory CD8 T-cell nTPM: 32.8
Samples: 5
Max nTPM: 45.3
Min nTPM: 21.7
P10809_1012
39.8
P10809_1027
25.7
P10809_1046
45.3
P10809_1065
31.7
P10809_1111
21.7
Naive CD4 T-cell nTPM: 35.8
Samples: 6
Max nTPM: 110.2
Min nTPM: 15.3
P10809_1015
30.4
P10809_1030
17.8
P10809_1049
110.2
P10809_1068
21.2
P10809_1085
19.7
P10809_1112
15.3
Naive CD8 T-cell nTPM: 23.0
Samples: 6
Max nTPM: 30.0
Min nTPM: 11.3
P10809_1016
28.0
P10809_1031
30.0
P10809_1050
22.2
P10809_1069
23.0
P10809_1087
11.3
P10809_1110
23.5
T-reg nTPM: 50.3
Samples: 6
Max nTPM: 175.9
Min nTPM: 15.1
P10809_1018
26.5
P10809_1037
25.1
P10809_1056
175.9
P10809_1075
28.8
P10809_1094
15.1
P10809_1106
30.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 15.6
Samples: 4
Max nTPM: 29.6
Min nTPM: 2.4
RHH5202_R3573
4.3
RHH5230_R3602
26.1
RHH5259_R3631
29.6
RHH5288_R3660
2.4
Effector memory CD8 T-cell nTPM: 19.8
Samples: 4
Max nTPM: 53.5
Min nTPM: 0.9
RHH5203_R3574
5.0
RHH5231_R3603
19.8
RHH5260_R3632
53.5
RHH5289_R3661
0.9
MAIT T-cell nTPM: 10.2
Samples: 4
Max nTPM: 22.3
Min nTPM: 1.7
RHH5233_R3605
6.6
RHH5205_R3576
1.7
RHH5262_R3634
22.3
RHH5297_R3663
10.0
Memory CD4 T-cell TFH nTPM: 32.0
Samples: 4
Max nTPM: 57.7
Min nTPM: 3.0
RHH5300_R3666
55.8
RHH5236_R3608
57.7
RHH5265_R3637
11.5
RHH5208_R3579
3.0
Memory CD4 T-cell Th1 nTPM: 25.8
Samples: 4
Max nTPM: 52.8
Min nTPM: 2.8
RHH5210_R3581
2.8
RHH5302_R3668
7.8
RHH5238_R3610
39.9
RHH5267_R3639
52.8
Memory CD4 T-cell Th1/Th17 nTPM: 18.1
Samples: 4
Max nTPM: 45.6
Min nTPM: 1.9
RHH5303_R3669
6.5
RHH5211_R3582
18.2
RHH5239_R3611
1.9
RHH5268_R3640
45.6
Memory CD4 T-cell Th17 nTPM: 26.4
Samples: 4
Max nTPM: 55.0
Min nTPM: 4.5
RHH5304_R3670
4.5
RHH5212_R3583
55.0
RHH5240_R3612
5.5
RHH5269_R3641
40.7
Memory CD4 T-cell Th2 nTPM: 24.7
Samples: 4
Max nTPM: 53.4
Min nTPM: 5.0
RHH5305_R3671
13.8
RHH5213_R3584
26.7
RHH5241_R3613
5.0
RHH5270_R3642
53.4
Naive CD4 T-cell nTPM: 21.8
Samples: 4
Max nTPM: 50.9
Min nTPM: 2.3
RHH5306_R3672
24.4
RHH5214_R3585
50.9
RHH5242_R3614
2.3
RHH5271_R3643
9.7
Naive CD8 T-cell nTPM: 12.4
Samples: 4
Max nTPM: 30.6
Min nTPM: 1.5
RHH5201_R3572
1.5
RHH5229_R3601
30.6
RHH5258_R3630
9.8
RHH5287_R3659
7.7
Non-Vd2 gdTCR nTPM: 32.1
Samples: 4
Max nTPM: 90.3
Min nTPM: 1.5
RHH5235_R3607
24.2
RHH5264_R3636
12.2
RHH5207_R3578
1.5
RHH5299_R3665
90.3
T-reg nTPM: 36.7
Samples: 4
Max nTPM: 44.0
Min nTPM: 31.7
RHH5301_R3667
44.0
RHH5237_R3609
31.7
RHH5266_R3638
31.8
RHH5209_R3580
39.4
Terminal effector memory CD4 T-cell nTPM: 12.5
Samples: 2
Max nTPM: 20.5
Min nTPM: 4.5
RHH5243_R3615
20.5
RHH5272_R3644
4.5
Terminal effector memory CD8 T-cell nTPM: 23.4
Samples: 4
Max nTPM: 65.8
Min nTPM: 2.6
RHH5232_R3604
8.2
RHH5204_R3575
16.8
RHH5261_R3633
65.8
RHH5296_R3662
2.6
Vd2 gdTCR nTPM: 13.8
Samples: 4
Max nTPM: 31.8
Min nTPM: 1.3
RHH5234_R3606
1.3
RHH5206_R3577
13.9
RHH5263_R3635
8.0
RHH5298_R3664
31.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
