HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:16.2 nTPM
HPA Brain:22.8 nTPM
GTEx:16.2 nTPM
FANTOM5:12.8 Scaled Tags Per Million
Pig:19.4 nTPM
Mouse:15.9 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020582
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.8
Sample id Sample description nTPM
Hippocampus
nTPM: 19.3
1898 Male, age 80, left hemisphere 23.3
2529 Female, age 94, left hemisphere 19.8
2148 Female, age 91, left hemisphere 18.8
2621 Female, age 67, right hemisphere 18.7
1911 Female, age 85, right hemisphere 18.5
1855 Male, age 76, left hemisphere 16.4
Dentate gyrus
nTPM: 20.5
2010 Male, age 76, both hemispheres 23.6
2530 Female, age 94, left hemisphere 22.9
1927 Female, age 91, both hemispheres 21.4
2528 Male, age 74, both hemispheres 20.3
2531 Female, age 67, both hemispheres 17.8
2246 Female, age 85, both hemispheres 17.0
Entorhinal gyrus
nTPM: 22.8
2764 Male, age 80, right hemisphere 26.6
2613 Female, age 94, left hemisphere 24.1
2117 Female, age 91, right hemisphere 23.8
1938 Female, age 85, left hemisphere 23.6
1787 Male, age 76, left hemisphere 20.2
2686 Male, age 75, right hemisphere 18.4
Hippocampus, CA1
nTPM: 21.4
2749 Male, age 80, left hemisphere 29.3
2082 Female, age 91, right hemisphere 20.1
1873 Female, age 85, both hemispheres 19.9
2045 Male, age 76, both hemispheres 19.9
2527 Male, age 74, both hemispheres 17.7
Hippocampus, CA2
nTPM: 21.1
1963 Male, age 80, left hemisphere 26.7
1892 Male, age 76, both hemispheres 21.6
2249 Male, age 74, both hemispheres 21.5
1940 Female, age 85, left hemisphere 19.2
2437 Female, age 94, left hemisphere 19.1
2113 Female, age 91, right hemisphere 18.7
Hippocampus, CA3
nTPM: 21.4
2436 Male, age 74, both hemispheres 27.5
1867 Male, age 76, both hemispheres 21.5
2620 Female, age 94, left hemisphere 21.4
2137 Male, age 80, left hemisphere 21.3
1891 Female, age 85, both hemispheres 19.2
2861 Female, age 67, both hemispheres 17.4
Parahippocampal cortex
nTPM: 19.2
1990 Female, age 91, right hemisphere 23.0
1850 Male, age 80, both hemispheres 20.4
2245 Female, age 91, both hemispheres 20.3
1933 Female, age 85, both hemispheres 19.8
2018 Male, age 76, both hemispheres 19.2
2250 Female, age 67, right hemisphere 18.7
2532 Female, age 72, left hemisphere 18.3
2622 Female, age 67, right hemisphere 18.0
2692 Male, age 74, both hemispheres 17.4
2693 Female, age 94, both hemispheres 17.4
Perirhinal gyrus
nTPM: 20.6
1794 Male, age 80, right hemisphere 22.7
1847 Female, age 91, left hemisphere 21.6
1841 Female, age 85, right hemisphere 20.2
2521 Female, age 94, right hemisphere 19.6
2848 Male, age 76, right hemisphere 19.0
Subiculum
nTPM: 21.1
1977 Female, age 85, both hemispheres 26.2
1901 Male, age 80, both hemispheres 21.5
2619 Male, age 74, both hemispheres 20.7
2729 Female, age 91, right hemisphere 19.9
2042 Male, age 76, both hemispheres 19.7
2438 Female, age 94, left hemisphere 18.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.2
Samples: 197

Max nTPM: 26.0
Min nTPM: 10.9
Std nTPM: 2.6
Median nTPM: 15.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 26.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 24.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 24.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 22.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 22.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 21.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 21.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 21.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 21.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 21.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.8
FF:10153-102I9 76 years, female 14.2
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.4
Pig sample Sample description nTPM
Subiculum
nTPM: 15.8
Samples: 4

Max nTPM: 20.8
Min nTPM: 12.3
Sample A Female 20.8
Sample B Female 13.6
Sample C Male 16.3
Sample D Male 12.3
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 25.8
Min nTPM: 14.3
Sample A Female 25.8
Sample B Female 18.8
Sample C Male 18.7
Sample D Male 14.3
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.6
Sample A Female 18.0
Sample B Female 17.2
Sample C Male 17.5
Sample D Male 14.6
Ventral hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 23.4
Min nTPM: 12.2
Sample A Female 19.2
Sample B Female 12.2
Sample C Male 23.4
Sample D Male 19.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.0
Sample A Male 17.8
Sample B Male 13.0
Sample C Female 17.2
Sample D Female 14.4
Hippocampal formation
nTPM: 15.9
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.1
Sample A Male 14.1
Sample B Male 14.1
Sample C Female 17.5
Sample D Female 18.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68151444 Antisense, RP_041116_01_C02, Mouse strain C57BL/6J (56 days, male) 0.5

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