HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:32.4 nTPM
HPA Brain:84.7 nTPM
GTEx:32.4 nTPM
FANTOM5:51.3 Scaled Tags Per Million
Pig:31.9 nTPM
Mouse:10.8 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020981Antibody HPA079208
Glial cells MediumMedium
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.7
Sample id Sample description nTPM
Hippocampus
nTPM: 69.8
2621 Female, age 67, right hemisphere 78.2
1855 Male, age 76, left hemisphere 74.2
1898 Male, age 80, left hemisphere 68.7
2529 Female, age 94, left hemisphere 68.2
2148 Female, age 91, left hemisphere 64.7
1911 Female, age 85, right hemisphere 64.5
Dentate gyrus
nTPM: 73.6
2530 Female, age 94, left hemisphere 106.0
2010 Male, age 76, both hemispheres 79.6
2528 Male, age 74, both hemispheres 69.3
2531 Female, age 67, both hemispheres 69.2
2246 Female, age 85, both hemispheres 67.2
1927 Female, age 91, both hemispheres 50.1
Entorhinal gyrus
nTPM: 84.7
2613 Female, age 94, left hemisphere 113.6
2117 Female, age 91, right hemisphere 97.1
2764 Male, age 80, right hemisphere 96.8
1787 Male, age 76, left hemisphere 68.4
1938 Female, age 85, left hemisphere 66.9
2686 Male, age 75, right hemisphere 65.4
Hippocampus, CA1
nTPM: 61.9
2527 Male, age 74, both hemispheres 70.3
2749 Male, age 80, left hemisphere 67.1
1873 Female, age 85, both hemispheres 60.7
2082 Female, age 91, right hemisphere 60.1
2045 Male, age 76, both hemispheres 51.4
Hippocampus, CA2
nTPM: 67.8
2437 Female, age 94, left hemisphere 82.0
1963 Male, age 80, left hemisphere 74.0
2249 Male, age 74, both hemispheres 69.4
1892 Male, age 76, both hemispheres 62.5
1940 Female, age 85, left hemisphere 60.8
2113 Female, age 91, right hemisphere 58.4
Hippocampus, CA3
nTPM: 62.4
1891 Female, age 85, both hemispheres 71.7
2620 Female, age 94, left hemisphere 69.1
1867 Male, age 76, both hemispheres 64.8
2861 Female, age 67, both hemispheres 62.9
2436 Male, age 74, both hemispheres 53.2
2137 Male, age 80, left hemisphere 52.4
Parahippocampal cortex
nTPM: 68.2
2692 Male, age 74, both hemispheres 88.8
2532 Female, age 72, left hemisphere 88.0
2245 Female, age 91, both hemispheres 72.4
1990 Female, age 91, right hemisphere 68.8
2693 Female, age 94, both hemispheres 68.2
1850 Male, age 80, both hemispheres 63.9
2018 Male, age 76, both hemispheres 60.9
1933 Female, age 85, both hemispheres 60.2
2622 Female, age 67, right hemisphere 59.1
2250 Female, age 67, right hemisphere 52.0
Perirhinal gyrus
nTPM: 56.2
2521 Female, age 94, right hemisphere 70.6
1794 Male, age 80, right hemisphere 59.1
1847 Female, age 91, left hemisphere 54.2
2848 Male, age 76, right hemisphere 52.2
1841 Female, age 85, right hemisphere 45.1
Subiculum
nTPM: 83.9
2042 Male, age 76, both hemispheres 104.5
1901 Male, age 80, both hemispheres 94.0
2438 Female, age 94, left hemisphere 89.5
1977 Female, age 85, both hemispheres 79.1
2619 Male, age 74, both hemispheres 78.1
2729 Female, age 91, right hemisphere 58.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.4
Samples: 197

Max nTPM: 99.4
Min nTPM: 9.4
Std nTPM: 13.6
Median nTPM: 30.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 99.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 93.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 78.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 71.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 70.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 65.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 63.2
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 59.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 59.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 57.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 55.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.3
FF:10153-102I9 76 years, female 61.1
FF:10169-103B7 60 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.9
Pig sample Sample description nTPM
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 29.5
Min nTPM: 17.0
Sample A Female 29.5
Sample B Female 22.6
Sample C Male 24.8
Sample D Male 17.0
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 44.7
Min nTPM: 18.7
Sample A Female 44.7
Sample B Female 29.7
Sample C Male 34.4
Sample D Male 18.7
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 21.7
Min nTPM: 17.9
Sample A Female 19.1
Sample B Female 18.8
Sample C Male 21.7
Sample D Male 17.9
Ventral hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 35.2
Min nTPM: 16.1
Sample A Female 25.6
Sample B Female 16.1
Sample C Male 35.2
Sample D Male 25.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.8
Sample A Male 10.9
Sample B Male 10.8
Sample C Female 10.0
Sample D Female 9.8
Hippocampal formation
nTPM: 10.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.0
Sample A Male 9.0
Sample B Male 11.4
Sample C Female 11.6
Sample D Female 11.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
70565867 Antisense, RP_050628_01_E07, Mouse strain C57BL/6J (56 days, male) 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org