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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
190.7
nTPM
Monaco:
229.7
nTPM
Schmiedel:
93.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
190.7
HPA sample
nTPM
gdT-cell nTPM: 190.7
Samples: 6
Max nTPM: 266.4
Min nTPM: 123.5
P10809_1007
123.5
P10809_1022
266.4
P10809_1041
252.4
P10809_1060
153.7
P10809_1077
169.8
P10809_1098
178.3
MAIT T-cell nTPM: 148.5
Samples: 6
Max nTPM: 198.5
Min nTPM: 110.1
P10809_1006
111.4
P10809_1024
198.5
P10809_1043
189.0
P10809_1062
158.4
P10809_1083
123.8
P10809_1097
110.1
Memory CD4 T-cell nTPM: 138.3
Samples: 6
Max nTPM: 162.5
Min nTPM: 102.6
P10809_1014
102.6
P10809_1026
162.5
P10809_1045
153.8
P10809_1064
148.3
P10809_1086
141.5
P10809_1113
121.3
Memory CD8 T-cell nTPM: 155.0
Samples: 5
Max nTPM: 192.6
Min nTPM: 115.4
P10809_1012
115.4
P10809_1027
192.6
P10809_1046
181.7
P10809_1065
158.7
P10809_1111
126.4
Naive CD4 T-cell nTPM: 136.9
Samples: 6
Max nTPM: 163.4
Min nTPM: 83.4
P10809_1015
83.4
P10809_1030
163.4
P10809_1049
154.9
P10809_1068
137.7
P10809_1085
155.0
P10809_1112
126.9
Naive CD8 T-cell nTPM: 145.5
Samples: 6
Max nTPM: 174.3
Min nTPM: 95.7
P10809_1016
95.7
P10809_1031
174.3
P10809_1050
162.3
P10809_1069
168.7
P10809_1087
146.0
P10809_1110
126.2
T-reg nTPM: 183.6
Samples: 6
Max nTPM: 255.8
Min nTPM: 135.0
P10809_1018
141.9
P10809_1037
185.2
P10809_1056
228.8
P10809_1075
155.0
P10809_1094
255.8
P10809_1106
135.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
229.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 175.0
Samples: 4
Max nTPM: 213.7
Min nTPM: 151.1
RHH5202_R3573
151.1
RHH5230_R3602
213.7
RHH5259_R3631
161.3
RHH5288_R3660
174.0
Effector memory CD8 T-cell nTPM: 229.7
Samples: 4
Max nTPM: 253.8
Min nTPM: 207.1
RHH5203_R3574
226.9
RHH5231_R3603
230.9
RHH5260_R3632
207.1
RHH5289_R3661
253.8
MAIT T-cell nTPM: 197.0
Samples: 4
Max nTPM: 241.7
Min nTPM: 143.7
RHH5233_R3605
241.7
RHH5205_R3576
226.8
RHH5262_R3634
175.7
RHH5297_R3663
143.7
Memory CD4 T-cell TFH nTPM: 201.5
Samples: 4
Max nTPM: 258.2
Min nTPM: 158.0
RHH5300_R3666
182.9
RHH5236_R3608
258.2
RHH5265_R3637
158.0
RHH5208_R3579
207.0
Memory CD4 T-cell Th1 nTPM: 193.8
Samples: 4
Max nTPM: 211.6
Min nTPM: 178.4
RHH5210_R3581
211.6
RHH5302_R3668
178.4
RHH5238_R3610
192.5
RHH5267_R3639
192.7
Memory CD4 T-cell Th1/Th17 nTPM: 195.0
Samples: 4
Max nTPM: 229.2
Min nTPM: 153.8
RHH5303_R3669
229.2
RHH5211_R3582
200.4
RHH5239_R3611
196.6
RHH5268_R3640
153.8
Memory CD4 T-cell Th17 nTPM: 192.8
Samples: 4
Max nTPM: 246.0
Min nTPM: 137.8
RHH5304_R3670
205.9
RHH5212_R3583
181.3
RHH5240_R3612
246.0
RHH5269_R3641
137.8
Memory CD4 T-cell Th2 nTPM: 200.6
Samples: 4
Max nTPM: 212.3
Min nTPM: 187.3
RHH5305_R3671
199.3
RHH5213_R3584
203.5
RHH5241_R3613
212.3
RHH5270_R3642
187.3
Naive CD4 T-cell nTPM: 164.9
Samples: 4
Max nTPM: 195.2
Min nTPM: 124.4
RHH5306_R3672
163.6
RHH5214_R3585
176.2
RHH5242_R3614
195.2
RHH5271_R3643
124.4
Naive CD8 T-cell nTPM: 193.0
Samples: 4
Max nTPM: 236.3
Min nTPM: 156.8
RHH5201_R3572
156.8
RHH5229_R3601
196.0
RHH5258_R3630
182.8
RHH5287_R3659
236.3
Non-Vd2 gdTCR nTPM: 214.5
Samples: 4
Max nTPM: 254.4
Min nTPM: 190.7
RHH5235_R3607
254.4
RHH5264_R3636
199.5
RHH5207_R3578
190.7
RHH5299_R3665
213.5
T-reg nTPM: 181.4
Samples: 4
Max nTPM: 261.3
Min nTPM: 136.7
RHH5301_R3667
159.4
RHH5237_R3609
261.3
RHH5266_R3638
136.7
RHH5209_R3580
168.0
Terminal effector memory CD4 T-cell nTPM: 187.3
Samples: 2
Max nTPM: 188.3
Min nTPM: 186.3
RHH5243_R3615
188.3
RHH5272_R3644
186.3
Terminal effector memory CD8 T-cell nTPM: 194.4
Samples: 4
Max nTPM: 226.3
Min nTPM: 160.7
RHH5232_R3604
226.3
RHH5204_R3575
180.7
RHH5261_R3633
160.7
RHH5296_R3662
210.0
Vd2 gdTCR nTPM: 196.6
Samples: 4
Max nTPM: 250.1
Min nTPM: 160.5
RHH5234_R3606
250.1
RHH5206_R3577
196.8
RHH5263_R3635
179.1
RHH5298_R3664
160.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
