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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
167.5
nTPM
Monaco:
141.5
nTPM
Schmiedel:
128.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
167.5
HPA sample
nTPM
gdT-cell nTPM: 52.4
Samples: 6
Max nTPM: 67.5
Min nTPM: 38.9
P10809_1007
46.4
P10809_1022
57.2
P10809_1041
67.5
P10809_1060
60.7
P10809_1077
38.9
P10809_1098
43.4
MAIT T-cell nTPM: 35.3
Samples: 6
Max nTPM: 46.7
Min nTPM: 26.0
P10809_1006
30.3
P10809_1024
30.9
P10809_1043
46.7
P10809_1062
37.3
P10809_1083
26.0
P10809_1097
40.4
Memory CD4 T-cell nTPM: 62.5
Samples: 6
Max nTPM: 84.8
Min nTPM: 38.7
P10809_1014
64.7
P10809_1026
84.8
P10809_1045
69.9
P10809_1064
55.3
P10809_1086
38.7
P10809_1113
61.4
Memory CD8 T-cell nTPM: 57.4
Samples: 5
Max nTPM: 72.5
Min nTPM: 49.4
P10809_1012
50.4
P10809_1027
72.5
P10809_1046
49.4
P10809_1065
52.1
P10809_1111
62.5
Naive CD4 T-cell nTPM: 59.1
Samples: 6
Max nTPM: 74.5
Min nTPM: 46.0
P10809_1015
56.9
P10809_1030
58.9
P10809_1049
74.5
P10809_1068
55.7
P10809_1085
46.0
P10809_1112
62.7
Naive CD8 T-cell nTPM: 44.3
Samples: 6
Max nTPM: 58.9
Min nTPM: 26.5
P10809_1016
48.1
P10809_1031
26.5
P10809_1050
50.8
P10809_1069
58.9
P10809_1087
30.2
P10809_1110
51.1
T-reg nTPM: 167.6
Samples: 6
Max nTPM: 192.4
Min nTPM: 138.4
P10809_1018
175.9
P10809_1037
178.3
P10809_1056
138.4
P10809_1075
139.9
P10809_1094
192.4
P10809_1106
180.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
141.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 83.9
Samples: 4
Max nTPM: 98.6
Min nTPM: 67.6
RHH5202_R3573
84.5
RHH5230_R3602
84.7
RHH5259_R3631
67.6
RHH5288_R3660
98.6
Effector memory CD8 T-cell nTPM: 75.3
Samples: 4
Max nTPM: 92.8
Min nTPM: 62.9
RHH5203_R3574
92.8
RHH5231_R3603
62.9
RHH5260_R3632
72.8
RHH5289_R3661
72.8
MAIT T-cell nTPM: 62.5
Samples: 4
Max nTPM: 81.4
Min nTPM: 35.8
RHH5233_R3605
75.6
RHH5205_R3576
35.8
RHH5262_R3634
81.4
RHH5297_R3663
57.0
Memory CD4 T-cell TFH nTPM: 100.0
Samples: 4
Max nTPM: 145.7
Min nTPM: 72.2
RHH5300_R3666
107.3
RHH5236_R3608
145.7
RHH5265_R3637
72.2
RHH5208_R3579
74.6
Memory CD4 T-cell Th1 nTPM: 82.3
Samples: 4
Max nTPM: 89.2
Min nTPM: 76.3
RHH5210_R3581
83.9
RHH5302_R3668
89.2
RHH5238_R3610
76.3
RHH5267_R3639
79.6
Memory CD4 T-cell Th1/Th17 nTPM: 77.5
Samples: 4
Max nTPM: 107.0
Min nTPM: 52.3
RHH5303_R3669
107.0
RHH5211_R3582
87.8
RHH5239_R3611
62.8
RHH5268_R3640
52.3
Memory CD4 T-cell Th17 nTPM: 80.7
Samples: 4
Max nTPM: 84.1
Min nTPM: 74.2
RHH5304_R3670
74.2
RHH5212_R3583
84.1
RHH5240_R3612
83.1
RHH5269_R3641
81.3
Memory CD4 T-cell Th2 nTPM: 88.8
Samples: 4
Max nTPM: 106.6
Min nTPM: 74.8
RHH5305_R3671
94.4
RHH5213_R3584
106.6
RHH5241_R3613
74.8
RHH5270_R3642
79.5
Naive CD4 T-cell nTPM: 88.1
Samples: 4
Max nTPM: 118.8
Min nTPM: 61.4
RHH5306_R3672
81.2
RHH5214_R3585
118.8
RHH5242_R3614
61.4
RHH5271_R3643
91.1
Naive CD8 T-cell nTPM: 73.9
Samples: 4
Max nTPM: 102.7
Min nTPM: 55.2
RHH5201_R3572
102.7
RHH5229_R3601
55.2
RHH5258_R3630
56.9
RHH5287_R3659
80.9
Non-Vd2 gdTCR nTPM: 77.3
Samples: 4
Max nTPM: 94.3
Min nTPM: 57.5
RHH5235_R3607
57.5
RHH5264_R3636
80.4
RHH5207_R3578
94.3
RHH5299_R3665
77.0
T-reg nTPM: 141.5
Samples: 4
Max nTPM: 182.1
Min nTPM: 113.7
RHH5301_R3667
141.8
RHH5237_R3609
182.1
RHH5266_R3638
128.5
RHH5209_R3580
113.7
Terminal effector memory CD4 T-cell nTPM: 73.0
Samples: 2
Max nTPM: 83.3
Min nTPM: 62.7
RHH5243_R3615
83.3
RHH5272_R3644
62.7
Terminal effector memory CD8 T-cell nTPM: 80.5
Samples: 4
Max nTPM: 87.3
Min nTPM: 77.7
RHH5232_R3604
87.3
RHH5204_R3575
78.4
RHH5261_R3633
77.7
RHH5296_R3662
78.6
Vd2 gdTCR nTPM: 72.5
Samples: 4
Max nTPM: 85.1
Min nTPM: 63.0
RHH5234_R3606
76.7
RHH5206_R3577
85.1
RHH5263_R3635
65.1
RHH5298_R3664
63.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
