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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
107.7
nTPM
Monaco:
261.6
nTPM
Schmiedel:
82.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.7
HPA sample
nTPM
gdT-cell nTPM: 56.7
Samples: 6
Max nTPM: 73.7
Min nTPM: 47.7
P10809_1007
52.9
P10809_1022
73.7
P10809_1041
58.4
P10809_1060
51.0
P10809_1077
56.6
P10809_1098
47.7
MAIT T-cell nTPM: 54.4
Samples: 6
Max nTPM: 59.9
Min nTPM: 44.4
P10809_1006
58.8
P10809_1024
51.8
P10809_1043
52.9
P10809_1062
58.4
P10809_1083
44.4
P10809_1097
59.9
Memory CD4 T-cell nTPM: 50.1
Samples: 6
Max nTPM: 61.9
Min nTPM: 38.3
P10809_1014
56.6
P10809_1026
38.3
P10809_1045
61.9
P10809_1064
48.0
P10809_1086
48.6
P10809_1113
46.9
Memory CD8 T-cell nTPM: 58.9
Samples: 5
Max nTPM: 61.8
Min nTPM: 50.7
P10809_1012
61.8
P10809_1027
61.1
P10809_1046
61.2
P10809_1065
50.7
P10809_1111
59.8
Naive CD4 T-cell nTPM: 50.7
Samples: 6
Max nTPM: 57.4
Min nTPM: 43.4
P10809_1015
53.8
P10809_1030
57.4
P10809_1049
46.7
P10809_1068
56.9
P10809_1085
43.4
P10809_1112
46.1
Naive CD8 T-cell nTPM: 56.0
Samples: 6
Max nTPM: 79.6
Min nTPM: 46.6
P10809_1016
57.5
P10809_1031
79.6
P10809_1050
48.5
P10809_1069
49.7
P10809_1087
54.3
P10809_1110
46.6
T-reg nTPM: 107.7
Samples: 6
Max nTPM: 144.3
Min nTPM: 72.4
P10809_1018
95.0
P10809_1037
144.3
P10809_1056
72.4
P10809_1075
99.0
P10809_1094
106.3
P10809_1106
129.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
261.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 189.5
Samples: 4
Max nTPM: 217.6
Min nTPM: 151.8
RHH5202_R3573
217.6
RHH5230_R3602
186.8
RHH5259_R3631
151.8
RHH5288_R3660
201.8
Effector memory CD8 T-cell nTPM: 261.6
Samples: 4
Max nTPM: 344.6
Min nTPM: 190.0
RHH5203_R3574
344.6
RHH5231_R3603
190.0
RHH5260_R3632
225.6
RHH5289_R3661
286.3
MAIT T-cell nTPM: 218.6
Samples: 4
Max nTPM: 314.3
Min nTPM: 146.9
RHH5233_R3605
220.2
RHH5205_R3576
314.3
RHH5262_R3634
192.9
RHH5297_R3663
146.9
Memory CD4 T-cell TFH nTPM: 160.2
Samples: 4
Max nTPM: 190.9
Min nTPM: 124.4
RHH5300_R3666
124.4
RHH5236_R3608
190.9
RHH5265_R3637
169.9
RHH5208_R3579
155.7
Memory CD4 T-cell Th1 nTPM: 190.6
Samples: 4
Max nTPM: 259.2
Min nTPM: 165.7
RHH5210_R3581
259.2
RHH5302_R3668
168.4
RHH5238_R3610
165.7
RHH5267_R3639
169.0
Memory CD4 T-cell Th1/Th17 nTPM: 228.4
Samples: 4
Max nTPM: 274.6
Min nTPM: 167.4
RHH5303_R3669
219.6
RHH5211_R3582
252.0
RHH5239_R3611
274.6
RHH5268_R3640
167.4
Memory CD4 T-cell Th17 nTPM: 247.1
Samples: 4
Max nTPM: 285.6
Min nTPM: 189.3
RHH5304_R3670
257.5
RHH5212_R3583
256.1
RHH5240_R3612
285.6
RHH5269_R3641
189.3
Memory CD4 T-cell Th2 nTPM: 230.7
Samples: 4
Max nTPM: 284.1
Min nTPM: 198.7
RHH5305_R3671
199.3
RHH5213_R3584
240.8
RHH5241_R3613
284.1
RHH5270_R3642
198.7
Naive CD4 T-cell nTPM: 178.9
Samples: 4
Max nTPM: 208.9
Min nTPM: 158.6
RHH5306_R3672
158.6
RHH5214_R3585
208.9
RHH5242_R3614
170.5
RHH5271_R3643
177.7
Naive CD8 T-cell nTPM: 179.6
Samples: 4
Max nTPM: 228.6
Min nTPM: 150.2
RHH5201_R3572
228.6
RHH5229_R3601
179.2
RHH5258_R3630
150.2
RHH5287_R3659
160.3
Non-Vd2 gdTCR nTPM: 235.7
Samples: 4
Max nTPM: 297.6
Min nTPM: 195.0
RHH5235_R3607
243.0
RHH5264_R3636
207.1
RHH5207_R3578
297.6
RHH5299_R3665
195.0
T-reg nTPM: 221.2
Samples: 4
Max nTPM: 266.5
Min nTPM: 176.5
RHH5301_R3667
176.5
RHH5237_R3609
266.5
RHH5266_R3638
204.0
RHH5209_R3580
237.8
Terminal effector memory CD4 T-cell nTPM: 181.1
Samples: 2
Max nTPM: 203.3
Min nTPM: 158.9
RHH5243_R3615
158.9
RHH5272_R3644
203.3
Terminal effector memory CD8 T-cell nTPM: 243.2
Samples: 4
Max nTPM: 249.9
Min nTPM: 237.0
RHH5232_R3604
237.0
RHH5204_R3575
249.9
RHH5261_R3633
248.7
RHH5296_R3662
237.0
Vd2 gdTCR nTPM: 213.7
Samples: 4
Max nTPM: 252.4
Min nTPM: 165.4
RHH5234_R3606
252.4
RHH5206_R3577
248.7
RHH5263_R3635
188.1
RHH5298_R3664
165.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
