We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.3
nTPM
Monaco:
203.6
nTPM
Schmiedel:
77.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.3
HPA sample
nTPM
gdT-cell nTPM: 18.0
Samples: 6
Max nTPM: 21.0
Min nTPM: 14.1
P10809_1007
14.1
P10809_1022
17.9
P10809_1041
18.2
P10809_1060
20.6
P10809_1077
21.0
P10809_1098
16.1
MAIT T-cell nTPM: 18.0
Samples: 6
Max nTPM: 23.3
Min nTPM: 11.5
P10809_1006
18.0
P10809_1024
21.6
P10809_1043
11.5
P10809_1062
23.3
P10809_1083
17.2
P10809_1097
16.5
Memory CD4 T-cell nTPM: 13.9
Samples: 6
Max nTPM: 18.0
Min nTPM: 9.1
P10809_1014
14.4
P10809_1026
9.1
P10809_1045
13.6
P10809_1064
14.7
P10809_1086
18.0
P10809_1113
13.4
Memory CD8 T-cell nTPM: 19.3
Samples: 5
Max nTPM: 23.9
Min nTPM: 17.7
P10809_1012
17.8
P10809_1027
18.3
P10809_1046
17.7
P10809_1065
23.9
P10809_1111
18.6
Naive CD4 T-cell nTPM: 18.1
Samples: 6
Max nTPM: 22.8
Min nTPM: 12.5
P10809_1015
17.8
P10809_1030
17.4
P10809_1049
12.5
P10809_1068
22.8
P10809_1085
20.5
P10809_1112
17.5
Naive CD8 T-cell nTPM: 16.3
Samples: 6
Max nTPM: 23.1
Min nTPM: 11.5
P10809_1016
17.4
P10809_1031
14.7
P10809_1050
11.5
P10809_1069
23.1
P10809_1087
18.9
P10809_1110
12.2
T-reg nTPM: 14.4
Samples: 6
Max nTPM: 20.9
Min nTPM: 7.5
P10809_1018
12.7
P10809_1037
12.0
P10809_1056
7.5
P10809_1075
20.9
P10809_1094
18.9
P10809_1106
14.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
203.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 131.2
Samples: 4
Max nTPM: 180.5
Min nTPM: 96.5
RHH5202_R3573
96.5
RHH5230_R3602
180.5
RHH5259_R3631
122.5
RHH5288_R3660
125.3
Effector memory CD8 T-cell nTPM: 146.6
Samples: 4
Max nTPM: 181.2
Min nTPM: 111.9
RHH5203_R3574
181.2
RHH5231_R3603
155.4
RHH5260_R3632
111.9
RHH5289_R3661
137.8
MAIT T-cell nTPM: 130.7
Samples: 4
Max nTPM: 166.4
Min nTPM: 116.7
RHH5233_R3605
166.4
RHH5205_R3576
120.0
RHH5262_R3634
116.7
RHH5297_R3663
119.8
Memory CD4 T-cell TFH nTPM: 94.5
Samples: 4
Max nTPM: 116.4
Min nTPM: 76.4
RHH5300_R3666
98.4
RHH5236_R3608
76.4
RHH5265_R3637
116.4
RHH5208_R3579
86.9
Memory CD4 T-cell Th1 nTPM: 127.3
Samples: 4
Max nTPM: 142.3
Min nTPM: 106.1
RHH5210_R3581
142.3
RHH5302_R3668
106.1
RHH5238_R3610
141.8
RHH5267_R3639
118.8
Memory CD4 T-cell Th1/Th17 nTPM: 121.5
Samples: 4
Max nTPM: 153.9
Min nTPM: 103.0
RHH5303_R3669
103.0
RHH5211_R3582
106.9
RHH5239_R3611
153.9
RHH5268_R3640
122.0
Memory CD4 T-cell Th17 nTPM: 118.0
Samples: 4
Max nTPM: 136.3
Min nTPM: 84.3
RHH5304_R3670
126.7
RHH5212_R3583
84.3
RHH5240_R3612
136.3
RHH5269_R3641
124.7
Memory CD4 T-cell Th2 nTPM: 123.5
Samples: 4
Max nTPM: 165.3
Min nTPM: 96.5
RHH5305_R3671
124.3
RHH5213_R3584
108.0
RHH5241_R3613
96.5
RHH5270_R3642
165.3
Naive CD4 T-cell nTPM: 130.5
Samples: 4
Max nTPM: 149.3
Min nTPM: 107.5
RHH5306_R3672
128.7
RHH5214_R3585
107.5
RHH5242_R3614
136.5
RHH5271_R3643
149.3
Naive CD8 T-cell nTPM: 106.9
Samples: 4
Max nTPM: 119.6
Min nTPM: 83.7
RHH5201_R3572
83.7
RHH5229_R3601
119.6
RHH5258_R3630
109.9
RHH5287_R3659
114.3
Non-Vd2 gdTCR nTPM: 145.7
Samples: 4
Max nTPM: 165.6
Min nTPM: 125.5
RHH5235_R3607
165.6
RHH5264_R3636
132.0
RHH5207_R3578
159.6
RHH5299_R3665
125.5
T-reg nTPM: 111.4
Samples: 4
Max nTPM: 151.5
Min nTPM: 77.4
RHH5301_R3667
96.3
RHH5237_R3609
77.4
RHH5266_R3638
151.5
RHH5209_R3580
120.3
Terminal effector memory CD4 T-cell nTPM: 203.7
Samples: 2
Max nTPM: 222.6
Min nTPM: 184.7
RHH5243_R3615
222.6
RHH5272_R3644
184.7
Terminal effector memory CD8 T-cell nTPM: 150.0
Samples: 4
Max nTPM: 168.1
Min nTPM: 134.6
RHH5232_R3604
168.1
RHH5204_R3575
145.4
RHH5261_R3633
152.0
RHH5296_R3662
134.6
Vd2 gdTCR nTPM: 119.7
Samples: 4
Max nTPM: 135.0
Min nTPM: 105.3
RHH5234_R3606
121.3
RHH5206_R3577
105.3
RHH5263_R3635
135.0
RHH5298_R3664
117.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
