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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.9
nTPM
Monaco:
15.7
nTPM
Schmiedel:
14.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.9
HPA sample
nTPM
gdT-cell nTPM: 11.6
Samples: 6
Max nTPM: 14.2
Min nTPM: 8.9
P10809_1007
14.2
P10809_1022
9.5
P10809_1041
14.0
P10809_1060
11.7
P10809_1077
8.9
P10809_1098
11.2
MAIT T-cell nTPM: 11.5
Samples: 6
Max nTPM: 20.3
Min nTPM: 6.3
P10809_1006
9.8
P10809_1024
9.3
P10809_1043
10.4
P10809_1062
12.9
P10809_1083
6.3
P10809_1097
20.3
Memory CD4 T-cell nTPM: 9.1
Samples: 6
Max nTPM: 10.7
Min nTPM: 7.4
P10809_1014
10.7
P10809_1026
9.0
P10809_1045
7.4
P10809_1064
10.3
P10809_1086
8.8
P10809_1113
8.4
Memory CD8 T-cell nTPM: 10.5
Samples: 5
Max nTPM: 14.3
Min nTPM: 6.9
P10809_1012
12.2
P10809_1027
9.5
P10809_1046
9.4
P10809_1065
6.9
P10809_1111
14.3
Naive CD4 T-cell nTPM: 6.9
Samples: 6
Max nTPM: 8.4
Min nTPM: 5.0
P10809_1015
8.4
P10809_1030
7.2
P10809_1049
5.0
P10809_1068
5.7
P10809_1085
7.7
P10809_1112
7.4
Naive CD8 T-cell nTPM: 8.2
Samples: 6
Max nTPM: 10.6
Min nTPM: 4.1
P10809_1016
9.5
P10809_1031
10.6
P10809_1050
4.1
P10809_1069
9.8
P10809_1087
9.7
P10809_1110
5.5
T-reg nTPM: 19.9
Samples: 6
Max nTPM: 25.7
Min nTPM: 14.5
P10809_1018
25.4
P10809_1037
14.5
P10809_1056
25.7
P10809_1075
17.3
P10809_1094
20.7
P10809_1106
15.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.6
Samples: 4
Max nTPM: 17.8
Min nTPM: 5.5
RHH5202_R3573
17.8
RHH5230_R3602
6.9
RHH5259_R3631
5.5
RHH5288_R3660
12.3
Effector memory CD8 T-cell nTPM: 9.5
Samples: 4
Max nTPM: 11.9
Min nTPM: 7.6
RHH5203_R3574
8.6
RHH5231_R3603
7.6
RHH5260_R3632
11.9
RHH5289_R3661
9.8
MAIT T-cell nTPM: 13.1
Samples: 4
Max nTPM: 26.6
Min nTPM: 7.0
RHH5233_R3605
26.6
RHH5205_R3576
7.0
RHH5262_R3634
7.3
RHH5297_R3663
11.5
Memory CD4 T-cell TFH nTPM: 12.1
Samples: 4
Max nTPM: 15.6
Min nTPM: 8.7
RHH5300_R3666
8.7
RHH5236_R3608
9.5
RHH5265_R3637
15.6
RHH5208_R3579
14.4
Memory CD4 T-cell Th1 nTPM: 12.2
Samples: 4
Max nTPM: 18.2
Min nTPM: 8.5
RHH5210_R3581
10.7
RHH5302_R3668
18.2
RHH5238_R3610
8.5
RHH5267_R3639
11.4
Memory CD4 T-cell Th1/Th17 nTPM: 10.2
Samples: 4
Max nTPM: 16.0
Min nTPM: 2.4
RHH5303_R3669
14.1
RHH5211_R3582
16.0
RHH5239_R3611
2.4
RHH5268_R3640
8.2
Memory CD4 T-cell Th17 nTPM: 8.7
Samples: 4
Max nTPM: 12.5
Min nTPM: 4.2
RHH5304_R3670
12.5
RHH5212_R3583
11.6
RHH5240_R3612
6.5
RHH5269_R3641
4.2
Memory CD4 T-cell Th2 nTPM: 10.8
Samples: 4
Max nTPM: 12.3
Min nTPM: 8.2
RHH5305_R3671
12.3
RHH5213_R3584
11.7
RHH5241_R3613
8.2
RHH5270_R3642
10.9
Naive CD4 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 16.1
Min nTPM: 7.2
RHH5306_R3672
9.9
RHH5214_R3585
16.1
RHH5242_R3614
11.7
RHH5271_R3643
7.2
Naive CD8 T-cell nTPM: 7.4
Samples: 4
Max nTPM: 10.8
Min nTPM: 3.3
RHH5201_R3572
10.8
RHH5229_R3601
3.3
RHH5258_R3630
7.4
RHH5287_R3659
8.1
Non-Vd2 gdTCR nTPM: 8.3
Samples: 4
Max nTPM: 15.7
Min nTPM: 3.5
RHH5235_R3607
7.8
RHH5264_R3636
3.5
RHH5207_R3578
6.3
RHH5299_R3665
15.7
T-reg nTPM: 15.5
Samples: 4
Max nTPM: 19.1
Min nTPM: 9.9
RHH5301_R3667
19.1
RHH5237_R3609
18.7
RHH5266_R3638
9.9
RHH5209_R3580
14.4
Terminal effector memory CD4 T-cell nTPM: 9.5
Samples: 2
Max nTPM: 12.2
Min nTPM: 6.7
RHH5243_R3615
6.7
RHH5272_R3644
12.2
Terminal effector memory CD8 T-cell nTPM: 15.7
Samples: 4
Max nTPM: 26.0
Min nTPM: 9.4
RHH5232_R3604
12.7
RHH5204_R3575
26.0
RHH5261_R3633
9.4
RHH5296_R3662
14.8
Vd2 gdTCR nTPM: 11.1
Samples: 4
Max nTPM: 19.4
Min nTPM: 5.1
RHH5234_R3606
5.1
RHH5206_R3577
19.4
RHH5263_R3635
10.0
RHH5298_R3664
10.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
