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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
25.0
nTPM
Monaco:
30.6
nTPM
Schmiedel:
277.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.0
HPA sample
nTPM
gdT-cell nTPM: 18.4
Samples: 6
Max nTPM: 21.7
Min nTPM: 12.5
P10809_1007
12.5
P10809_1022
20.9
P10809_1041
18.7
P10809_1060
17.5
P10809_1077
19.3
P10809_1098
21.7
MAIT T-cell nTPM: 18.3
Samples: 6
Max nTPM: 29.6
Min nTPM: 11.9
P10809_1006
17.2
P10809_1024
29.6
P10809_1043
16.5
P10809_1062
20.5
P10809_1083
14.1
P10809_1097
11.9
Memory CD4 T-cell nTPM: 16.1
Samples: 6
Max nTPM: 18.8
Min nTPM: 11.1
P10809_1014
17.2
P10809_1026
11.1
P10809_1045
17.3
P10809_1064
13.9
P10809_1086
18.2
P10809_1113
18.8
Memory CD8 T-cell nTPM: 20.3
Samples: 5
Max nTPM: 23.7
Min nTPM: 15.8
P10809_1012
20.5
P10809_1027
22.3
P10809_1046
15.8
P10809_1065
23.7
P10809_1111
19.4
Naive CD4 T-cell nTPM: 18.2
Samples: 6
Max nTPM: 23.4
Min nTPM: 13.4
P10809_1015
19.7
P10809_1030
20.2
P10809_1049
14.1
P10809_1068
23.4
P10809_1085
13.4
P10809_1112
18.6
Naive CD8 T-cell nTPM: 18.8
Samples: 6
Max nTPM: 23.6
Min nTPM: 11.1
P10809_1016
19.1
P10809_1031
22.4
P10809_1050
11.1
P10809_1069
22.8
P10809_1087
23.6
P10809_1110
14.0
T-reg nTPM: 25.0
Samples: 6
Max nTPM: 39.5
Min nTPM: 18.8
P10809_1018
19.0
P10809_1037
25.9
P10809_1056
18.8
P10809_1075
19.7
P10809_1094
26.9
P10809_1106
39.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 5.4
Samples: 4
Max nTPM: 13.7
Min nTPM: 1.4
RHH5202_R3573
1.4
RHH5230_R3602
13.7
RHH5259_R3631
2.3
RHH5288_R3660
4.2
Effector memory CD8 T-cell nTPM: 30.6
Samples: 4
Max nTPM: 42.9
Min nTPM: 24.6
RHH5203_R3574
42.9
RHH5231_R3603
26.1
RHH5260_R3632
28.9
RHH5289_R3661
24.6
MAIT T-cell nTPM: 15.3
Samples: 4
Max nTPM: 20.7
Min nTPM: 5.7
RHH5233_R3605
17.0
RHH5205_R3576
5.7
RHH5262_R3634
20.7
RHH5297_R3663
17.6
Memory CD4 T-cell TFH nTPM: 19.1
Samples: 4
Max nTPM: 36.8
Min nTPM: 4.9
RHH5300_R3666
14.6
RHH5236_R3608
36.8
RHH5265_R3637
20.2
RHH5208_R3579
4.9
Memory CD4 T-cell Th1 nTPM: 11.4
Samples: 4
Max nTPM: 16.3
Min nTPM: 7.2
RHH5210_R3581
16.3
RHH5302_R3668
7.2
RHH5238_R3610
7.7
RHH5267_R3639
14.3
Memory CD4 T-cell Th1/Th17 nTPM: 10.9
Samples: 4
Max nTPM: 12.3
Min nTPM: 9.2
RHH5303_R3669
10.1
RHH5211_R3582
11.8
RHH5239_R3611
9.2
RHH5268_R3640
12.3
Memory CD4 T-cell Th17 nTPM: 18.1
Samples: 4
Max nTPM: 29.6
Min nTPM: 5.8
RHH5304_R3670
29.6
RHH5212_R3583
5.8
RHH5240_R3612
15.9
RHH5269_R3641
21.1
Memory CD4 T-cell Th2 nTPM: 14.9
Samples: 4
Max nTPM: 19.9
Min nTPM: 7.5
RHH5305_R3671
15.9
RHH5213_R3584
19.9
RHH5241_R3613
7.5
RHH5270_R3642
16.1
Naive CD4 T-cell nTPM: 9.3
Samples: 4
Max nTPM: 15.7
Min nTPM: 6.4
RHH5306_R3672
7.4
RHH5214_R3585
6.4
RHH5242_R3614
15.7
RHH5271_R3643
7.7
Naive CD8 T-cell nTPM: 7.8
Samples: 4
Max nTPM: 13.3
Min nTPM: 1.5
RHH5201_R3572
12.5
RHH5229_R3601
1.5
RHH5258_R3630
13.3
RHH5287_R3659
4.0
Non-Vd2 gdTCR nTPM: 20.1
Samples: 4
Max nTPM: 37.4
Min nTPM: 7.1
RHH5235_R3607
7.1
RHH5264_R3636
37.4
RHH5207_R3578
18.5
RHH5299_R3665
17.3
T-reg nTPM: 15.2
Samples: 4
Max nTPM: 25.7
Min nTPM: 7.8
RHH5301_R3667
7.8
RHH5237_R3609
25.7
RHH5266_R3638
18.7
RHH5209_R3580
8.7
Terminal effector memory CD4 T-cell nTPM: 15.1
Samples: 2
Max nTPM: 25.6
Min nTPM: 4.5
RHH5243_R3615
4.5
RHH5272_R3644
25.6
Terminal effector memory CD8 T-cell nTPM: 26.2
Samples: 4
Max nTPM: 56.4
Min nTPM: 10.2
RHH5232_R3604
56.4
RHH5204_R3575
10.2
RHH5261_R3633
20.2
RHH5296_R3662
18.1
Vd2 gdTCR nTPM: 17.9
Samples: 4
Max nTPM: 24.5
Min nTPM: 10.5
RHH5234_R3606
22.8
RHH5206_R3577
24.5
RHH5263_R3635
10.5
RHH5298_R3664
13.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
