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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.4
nTPM
Monaco:
221.4
nTPM
Schmiedel:
134.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.4
HPA sample
nTPM
gdT-cell nTPM: 28.7
Samples: 6
Max nTPM: 29.9
Min nTPM: 27.3
P10809_1007
27.3
P10809_1022
29.9
P10809_1041
28.7
P10809_1060
29.9
P10809_1077
27.8
P10809_1098
28.4
MAIT T-cell nTPM: 33.3
Samples: 6
Max nTPM: 43.4
Min nTPM: 29.8
P10809_1006
43.4
P10809_1024
31.6
P10809_1043
30.8
P10809_1062
32.8
P10809_1083
29.8
P10809_1097
31.6
Memory CD4 T-cell nTPM: 30.5
Samples: 6
Max nTPM: 36.4
Min nTPM: 19.2
P10809_1014
36.4
P10809_1026
19.2
P10809_1045
31.0
P10809_1064
30.4
P10809_1086
33.1
P10809_1113
32.7
Memory CD8 T-cell nTPM: 32.4
Samples: 5
Max nTPM: 40.6
Min nTPM: 26.5
P10809_1012
40.6
P10809_1027
27.2
P10809_1046
30.6
P10809_1065
26.5
P10809_1111
37.1
Naive CD4 T-cell nTPM: 36.4
Samples: 6
Max nTPM: 42.5
Min nTPM: 32.8
P10809_1015
42.5
P10809_1030
32.8
P10809_1049
33.0
P10809_1068
39.8
P10809_1085
35.9
P10809_1112
34.4
Naive CD8 T-cell nTPM: 36.1
Samples: 6
Max nTPM: 43.2
Min nTPM: 29.3
P10809_1016
40.7
P10809_1031
43.2
P10809_1050
31.2
P10809_1069
29.3
P10809_1087
35.2
P10809_1110
36.8
T-reg nTPM: 34.4
Samples: 6
Max nTPM: 42.8
Min nTPM: 20.0
P10809_1018
33.8
P10809_1037
40.9
P10809_1056
20.0
P10809_1075
27.0
P10809_1094
42.8
P10809_1106
41.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
221.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 184.3
Samples: 4
Max nTPM: 250.6
Min nTPM: 111.2
RHH5202_R3573
176.3
RHH5230_R3602
198.9
RHH5259_R3631
250.6
RHH5288_R3660
111.2
Effector memory CD8 T-cell nTPM: 183.6
Samples: 4
Max nTPM: 212.1
Min nTPM: 127.3
RHH5203_R3574
192.9
RHH5231_R3603
127.3
RHH5260_R3632
202.2
RHH5289_R3661
212.1
MAIT T-cell nTPM: 184.5
Samples: 4
Max nTPM: 230.2
Min nTPM: 128.9
RHH5233_R3605
198.9
RHH5205_R3576
230.2
RHH5262_R3634
180.0
RHH5297_R3663
128.9
Memory CD4 T-cell TFH nTPM: 218.1
Samples: 4
Max nTPM: 281.1
Min nTPM: 160.9
RHH5300_R3666
160.9
RHH5236_R3608
220.5
RHH5265_R3637
209.9
RHH5208_R3579
281.1
Memory CD4 T-cell Th1 nTPM: 196.7
Samples: 4
Max nTPM: 249.8
Min nTPM: 148.5
RHH5210_R3581
187.5
RHH5302_R3668
148.5
RHH5238_R3610
249.8
RHH5267_R3639
200.9
Memory CD4 T-cell Th1/Th17 nTPM: 193.0
Samples: 4
Max nTPM: 237.6
Min nTPM: 167.7
RHH5303_R3669
167.7
RHH5211_R3582
194.5
RHH5239_R3611
237.6
RHH5268_R3640
172.3
Memory CD4 T-cell Th17 nTPM: 221.4
Samples: 4
Max nTPM: 246.2
Min nTPM: 190.8
RHH5304_R3670
190.8
RHH5212_R3583
205.9
RHH5240_R3612
246.2
RHH5269_R3641
242.5
Memory CD4 T-cell Th2 nTPM: 195.4
Samples: 4
Max nTPM: 256.0
Min nTPM: 155.2
RHH5305_R3671
168.3
RHH5213_R3584
256.0
RHH5241_R3613
155.2
RHH5270_R3642
202.2
Naive CD4 T-cell nTPM: 200.0
Samples: 4
Max nTPM: 223.1
Min nTPM: 147.8
RHH5306_R3672
147.8
RHH5214_R3585
211.5
RHH5242_R3614
223.1
RHH5271_R3643
217.6
Naive CD8 T-cell nTPM: 178.8
Samples: 4
Max nTPM: 198.9
Min nTPM: 152.8
RHH5201_R3572
198.6
RHH5229_R3601
198.9
RHH5258_R3630
152.8
RHH5287_R3659
165.0
Non-Vd2 gdTCR nTPM: 169.4
Samples: 4
Max nTPM: 221.4
Min nTPM: 116.4
RHH5235_R3607
212.0
RHH5264_R3636
127.8
RHH5207_R3578
221.4
RHH5299_R3665
116.4
T-reg nTPM: 216.5
Samples: 4
Max nTPM: 285.3
Min nTPM: 148.0
RHH5301_R3667
148.0
RHH5237_R3609
244.3
RHH5266_R3638
188.2
RHH5209_R3580
285.3
Terminal effector memory CD4 T-cell nTPM: 202.6
Samples: 2
Max nTPM: 216.6
Min nTPM: 188.5
RHH5243_R3615
188.5
RHH5272_R3644
216.6
Terminal effector memory CD8 T-cell nTPM: 172.3
Samples: 4
Max nTPM: 211.4
Min nTPM: 152.9
RHH5232_R3604
211.4
RHH5204_R3575
152.9
RHH5261_R3633
159.6
RHH5296_R3662
165.4
Vd2 gdTCR nTPM: 159.9
Samples: 4
Max nTPM: 219.9
Min nTPM: 112.6
RHH5234_R3606
165.2
RHH5206_R3577
142.0
RHH5263_R3635
219.9
RHH5298_R3664
112.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
