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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
103.8
nTPM
Monaco:
118.9
nTPM
Schmiedel:
53.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.8
HPA sample
nTPM
gdT-cell nTPM: 81.0
Samples: 6
Max nTPM: 115.3
Min nTPM: 57.2
P10809_1007
60.5
P10809_1022
113.7
P10809_1041
115.3
P10809_1060
57.2
P10809_1077
73.5
P10809_1098
66.0
MAIT T-cell nTPM: 72.0
Samples: 6
Max nTPM: 94.7
Min nTPM: 48.8
P10809_1006
48.8
P10809_1024
83.4
P10809_1043
94.7
P10809_1062
69.5
P10809_1083
76.0
P10809_1097
59.6
Memory CD4 T-cell nTPM: 85.4
Samples: 6
Max nTPM: 109.5
Min nTPM: 64.1
P10809_1014
70.2
P10809_1026
104.2
P10809_1045
109.5
P10809_1064
64.1
P10809_1086
91.6
P10809_1113
72.5
Memory CD8 T-cell nTPM: 85.9
Samples: 5
Max nTPM: 106.2
Min nTPM: 67.9
P10809_1012
77.6
P10809_1027
103.7
P10809_1046
106.2
P10809_1065
67.9
P10809_1111
73.9
Naive CD4 T-cell nTPM: 81.3
Samples: 6
Max nTPM: 104.9
Min nTPM: 55.0
P10809_1015
55.0
P10809_1030
104.9
P10809_1049
102.9
P10809_1068
58.5
P10809_1085
94.0
P10809_1112
72.7
Naive CD8 T-cell nTPM: 75.0
Samples: 6
Max nTPM: 95.5
Min nTPM: 57.0
P10809_1016
57.0
P10809_1031
60.7
P10809_1050
92.7
P10809_1069
77.8
P10809_1087
95.5
P10809_1110
66.3
T-reg nTPM: 103.8
Samples: 6
Max nTPM: 146.0
Min nTPM: 68.5
P10809_1018
74.4
P10809_1037
132.2
P10809_1056
146.0
P10809_1075
68.5
P10809_1094
104.8
P10809_1106
97.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 79.9
Samples: 4
Max nTPM: 106.2
Min nTPM: 50.2
RHH5202_R3573
89.8
RHH5230_R3602
73.4
RHH5259_R3631
50.2
RHH5288_R3660
106.2
Effector memory CD8 T-cell nTPM: 111.3
Samples: 4
Max nTPM: 150.3
Min nTPM: 81.5
RHH5203_R3574
104.6
RHH5231_R3603
108.8
RHH5260_R3632
81.5
RHH5289_R3661
150.3
MAIT T-cell nTPM: 80.8
Samples: 4
Max nTPM: 97.2
Min nTPM: 57.0
RHH5233_R3605
97.2
RHH5205_R3576
57.0
RHH5262_R3634
81.3
RHH5297_R3663
87.7
Memory CD4 T-cell TFH nTPM: 91.6
Samples: 4
Max nTPM: 125.0
Min nTPM: 70.7
RHH5300_R3666
90.0
RHH5236_R3608
125.0
RHH5265_R3637
70.7
RHH5208_R3579
80.6
Memory CD4 T-cell Th1 nTPM: 84.2
Samples: 4
Max nTPM: 111.5
Min nTPM: 67.8
RHH5210_R3581
89.3
RHH5302_R3668
111.5
RHH5238_R3610
68.3
RHH5267_R3639
67.8
Memory CD4 T-cell Th1/Th17 nTPM: 92.6
Samples: 4
Max nTPM: 149.9
Min nTPM: 43.6
RHH5303_R3669
149.9
RHH5211_R3582
105.4
RHH5239_R3611
43.6
RHH5268_R3640
71.4
Memory CD4 T-cell Th17 nTPM: 73.5
Samples: 4
Max nTPM: 82.9
Min nTPM: 62.6
RHH5304_R3670
62.6
RHH5212_R3583
80.8
RHH5240_R3612
82.9
RHH5269_R3641
67.5
Memory CD4 T-cell Th2 nTPM: 90.9
Samples: 4
Max nTPM: 104.7
Min nTPM: 77.6
RHH5305_R3671
83.7
RHH5213_R3584
97.5
RHH5241_R3613
104.7
RHH5270_R3642
77.6
Naive CD4 T-cell nTPM: 75.5
Samples: 4
Max nTPM: 92.5
Min nTPM: 61.4
RHH5306_R3672
62.2
RHH5214_R3585
86.0
RHH5242_R3614
92.5
RHH5271_R3643
61.4
Naive CD8 T-cell nTPM: 84.6
Samples: 4
Max nTPM: 105.4
Min nTPM: 54.8
RHH5201_R3572
105.4
RHH5229_R3601
54.8
RHH5258_R3630
98.9
RHH5287_R3659
79.1
Non-Vd2 gdTCR nTPM: 118.9
Samples: 4
Max nTPM: 144.1
Min nTPM: 88.3
RHH5235_R3607
88.3
RHH5264_R3636
144.1
RHH5207_R3578
125.3
RHH5299_R3665
117.9
T-reg nTPM: 86.8
Samples: 4
Max nTPM: 125.4
Min nTPM: 59.0
RHH5301_R3667
88.0
RHH5237_R3609
125.4
RHH5266_R3638
59.0
RHH5209_R3580
74.8
Terminal effector memory CD4 T-cell nTPM: 106.7
Samples: 2
Max nTPM: 106.9
Min nTPM: 106.5
RHH5243_R3615
106.5
RHH5272_R3644
106.9
Terminal effector memory CD8 T-cell nTPM: 111.7
Samples: 4
Max nTPM: 133.1
Min nTPM: 96.6
RHH5232_R3604
110.1
RHH5204_R3575
106.8
RHH5261_R3633
96.6
RHH5296_R3662
133.1
Vd2 gdTCR nTPM: 103.3
Samples: 4
Max nTPM: 118.9
Min nTPM: 84.3
RHH5234_R3606
112.3
RHH5206_R3577
118.9
RHH5263_R3635
84.3
RHH5298_R3664
97.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
