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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.7
nTPM
Monaco:
51.0
nTPM
Schmiedel:
161.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.7
HPA sample
nTPM
gdT-cell nTPM: 71.7
Samples: 6
Max nTPM: 118.8
Min nTPM: 41.5
P10809_1007
41.5
P10809_1022
83.4
P10809_1041
118.8
P10809_1060
56.9
P10809_1077
54.6
P10809_1098
75.2
MAIT T-cell nTPM: 66.2
Samples: 6
Max nTPM: 88.7
Min nTPM: 37.1
P10809_1006
37.1
P10809_1024
73.9
P10809_1043
88.7
P10809_1062
64.6
P10809_1083
49.8
P10809_1097
83.3
Memory CD4 T-cell nTPM: 62.9
Samples: 6
Max nTPM: 97.5
Min nTPM: 37.3
P10809_1014
37.3
P10809_1026
97.5
P10809_1045
73.7
P10809_1064
57.8
P10809_1086
46.1
P10809_1113
65.0
Memory CD8 T-cell nTPM: 62.6
Samples: 5
Max nTPM: 86.8
Min nTPM: 42.0
P10809_1012
42.0
P10809_1027
57.9
P10809_1046
86.8
P10809_1065
62.5
P10809_1111
63.8
Naive CD4 T-cell nTPM: 65.0
Samples: 6
Max nTPM: 113.5
Min nTPM: 39.8
P10809_1015
39.8
P10809_1030
51.5
P10809_1049
113.5
P10809_1068
61.2
P10809_1085
64.7
P10809_1112
59.4
Naive CD8 T-cell nTPM: 64.9
Samples: 6
Max nTPM: 85.1
Min nTPM: 38.2
P10809_1016
38.2
P10809_1031
78.0
P10809_1050
65.8
P10809_1069
85.1
P10809_1087
63.6
P10809_1110
58.4
T-reg nTPM: 69.1
Samples: 6
Max nTPM: 102.1
Min nTPM: 44.1
P10809_1018
44.1
P10809_1037
81.7
P10809_1056
102.1
P10809_1075
52.9
P10809_1094
80.0
P10809_1106
53.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 28.1
Samples: 4
Max nTPM: 50.4
Min nTPM: 9.1
RHH5202_R3573
50.4
RHH5230_R3602
9.1
RHH5259_R3631
15.9
RHH5288_R3660
37.1
Effector memory CD8 T-cell nTPM: 23.7
Samples: 4
Max nTPM: 33.5
Min nTPM: 17.4
RHH5203_R3574
23.7
RHH5231_R3603
20.3
RHH5260_R3632
33.5
RHH5289_R3661
17.4
MAIT T-cell nTPM: 42.7
Samples: 4
Max nTPM: 54.8
Min nTPM: 33.9
RHH5233_R3605
45.8
RHH5205_R3576
36.1
RHH5262_R3634
54.8
RHH5297_R3663
33.9
Memory CD4 T-cell TFH nTPM: 33.2
Samples: 4
Max nTPM: 52.5
Min nTPM: 10.6
RHH5300_R3666
52.5
RHH5236_R3608
10.6
RHH5265_R3637
49.7
RHH5208_R3579
20.1
Memory CD4 T-cell Th1 nTPM: 33.7
Samples: 4
Max nTPM: 62.6
Min nTPM: 9.8
RHH5210_R3581
62.6
RHH5302_R3668
26.0
RHH5238_R3610
9.8
RHH5267_R3639
36.2
Memory CD4 T-cell Th1/Th17 nTPM: 22.1
Samples: 4
Max nTPM: 35.2
Min nTPM: 15.8
RHH5303_R3669
18.5
RHH5211_R3582
35.2
RHH5239_R3611
18.8
RHH5268_R3640
15.8
Memory CD4 T-cell Th17 nTPM: 33.0
Samples: 4
Max nTPM: 40.5
Min nTPM: 25.2
RHH5304_R3670
25.2
RHH5212_R3583
40.5
RHH5240_R3612
31.6
RHH5269_R3641
34.6
Memory CD4 T-cell Th2 nTPM: 22.1
Samples: 4
Max nTPM: 35.1
Min nTPM: 9.7
RHH5305_R3671
17.4
RHH5213_R3584
26.3
RHH5241_R3613
35.1
RHH5270_R3642
9.7
Naive CD4 T-cell nTPM: 44.6
Samples: 4
Max nTPM: 49.9
Min nTPM: 34.2
RHH5306_R3672
49.9
RHH5214_R3585
47.8
RHH5242_R3614
46.5
RHH5271_R3643
34.2
Naive CD8 T-cell nTPM: 51.0
Samples: 4
Max nTPM: 63.3
Min nTPM: 32.4
RHH5201_R3572
63.3
RHH5229_R3601
32.4
RHH5258_R3630
58.2
RHH5287_R3659
50.2
Non-Vd2 gdTCR nTPM: 34.8
Samples: 4
Max nTPM: 51.7
Min nTPM: 26.9
RHH5235_R3607
26.9
RHH5264_R3636
30.9
RHH5207_R3578
51.7
RHH5299_R3665
29.5
T-reg nTPM: 49.8
Samples: 4
Max nTPM: 60.3
Min nTPM: 35.7
RHH5301_R3667
58.3
RHH5237_R3609
35.7
RHH5266_R3638
60.3
RHH5209_R3580
45.0
Terminal effector memory CD4 T-cell nTPM: 47.3
Samples: 2
Max nTPM: 58.4
Min nTPM: 36.1
RHH5243_R3615
58.4
RHH5272_R3644
36.1
Terminal effector memory CD8 T-cell nTPM: 26.1
Samples: 4
Max nTPM: 38.7
Min nTPM: 9.0
RHH5232_R3604
38.7
RHH5204_R3575
29.4
RHH5261_R3633
9.0
RHH5296_R3662
27.4
Vd2 gdTCR nTPM: 34.0
Samples: 4
Max nTPM: 58.9
Min nTPM: 8.6
RHH5234_R3606
39.8
RHH5206_R3577
58.9
RHH5263_R3635
8.6
RHH5298_R3664
28.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
