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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
191.1
nTPM
Monaco:
182.6
nTPM
Schmiedel:
118.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
191.1
HPA sample
nTPM
gdT-cell nTPM: 153.4
Samples: 6
Max nTPM: 214.2
Min nTPM: 116.2
P10809_1007
146.6
P10809_1022
149.0
P10809_1041
214.2
P10809_1060
127.1
P10809_1077
116.2
P10809_1098
167.4
MAIT T-cell nTPM: 172.6
Samples: 6
Max nTPM: 207.6
Min nTPM: 128.5
P10809_1006
175.3
P10809_1024
153.8
P10809_1043
207.6
P10809_1062
177.0
P10809_1083
128.5
P10809_1097
193.1
Memory CD4 T-cell nTPM: 137.0
Samples: 6
Max nTPM: 178.2
Min nTPM: 92.9
P10809_1014
140.5
P10809_1026
142.3
P10809_1045
178.2
P10809_1064
147.5
P10809_1086
92.9
P10809_1113
120.8
Memory CD8 T-cell nTPM: 186.5
Samples: 5
Max nTPM: 206.1
Min nTPM: 170.6
P10809_1012
179.3
P10809_1027
186.2
P10809_1046
206.1
P10809_1065
170.6
P10809_1111
190.4
Naive CD4 T-cell nTPM: 191.1
Samples: 6
Max nTPM: 255.1
Min nTPM: 139.5
P10809_1015
170.0
P10809_1030
170.2
P10809_1049
255.1
P10809_1068
230.9
P10809_1085
139.5
P10809_1112
181.1
Naive CD8 T-cell nTPM: 188.9
Samples: 6
Max nTPM: 228.9
Min nTPM: 110.5
P10809_1016
222.8
P10809_1031
180.8
P10809_1050
192.2
P10809_1069
197.9
P10809_1087
110.5
P10809_1110
228.9
T-reg nTPM: 179.9
Samples: 6
Max nTPM: 223.2
Min nTPM: 157.8
P10809_1018
166.9
P10809_1037
157.8
P10809_1056
223.2
P10809_1075
188.8
P10809_1094
169.2
P10809_1106
173.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
182.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 165.4
Samples: 4
Max nTPM: 297.8
Min nTPM: 99.0
RHH5202_R3573
163.0
RHH5230_R3602
99.0
RHH5259_R3631
101.6
RHH5288_R3660
297.8
Effector memory CD8 T-cell nTPM: 110.2
Samples: 4
Max nTPM: 134.3
Min nTPM: 79.2
RHH5203_R3574
132.2
RHH5231_R3603
134.3
RHH5260_R3632
95.1
RHH5289_R3661
79.2
MAIT T-cell nTPM: 178.9
Samples: 4
Max nTPM: 255.5
Min nTPM: 102.5
RHH5233_R3605
220.0
RHH5205_R3576
102.5
RHH5262_R3634
137.5
RHH5297_R3663
255.5
Memory CD4 T-cell TFH nTPM: 149.4
Samples: 4
Max nTPM: 207.4
Min nTPM: 96.4
RHH5300_R3666
207.4
RHH5236_R3608
186.8
RHH5265_R3637
106.9
RHH5208_R3579
96.4
Memory CD4 T-cell Th1 nTPM: 174.5
Samples: 4
Max nTPM: 321.8
Min nTPM: 105.8
RHH5210_R3581
164.0
RHH5302_R3668
321.8
RHH5238_R3610
105.8
RHH5267_R3639
106.4
Memory CD4 T-cell Th1/Th17 nTPM: 110.1
Samples: 4
Max nTPM: 190.8
Min nTPM: 59.2
RHH5303_R3669
190.8
RHH5211_R3582
129.3
RHH5239_R3611
61.0
RHH5268_R3640
59.2
Memory CD4 T-cell Th17 nTPM: 83.2
Samples: 4
Max nTPM: 114.1
Min nTPM: 48.4
RHH5304_R3670
112.5
RHH5212_R3583
114.1
RHH5240_R3612
48.4
RHH5269_R3641
57.7
Memory CD4 T-cell Th2 nTPM: 128.6
Samples: 4
Max nTPM: 194.2
Min nTPM: 85.9
RHH5305_R3671
194.2
RHH5213_R3584
85.9
RHH5241_R3613
147.3
RHH5270_R3642
86.8
Naive CD4 T-cell nTPM: 181.9
Samples: 4
Max nTPM: 258.5
Min nTPM: 74.9
RHH5306_R3672
258.5
RHH5214_R3585
251.3
RHH5242_R3614
142.7
RHH5271_R3643
74.9
Naive CD8 T-cell nTPM: 142.2
Samples: 4
Max nTPM: 186.0
Min nTPM: 102.7
RHH5201_R3572
102.7
RHH5229_R3601
109.5
RHH5258_R3630
186.0
RHH5287_R3659
170.6
Non-Vd2 gdTCR nTPM: 130.9
Samples: 4
Max nTPM: 198.2
Min nTPM: 87.4
RHH5235_R3607
94.4
RHH5264_R3636
143.7
RHH5207_R3578
87.4
RHH5299_R3665
198.2
T-reg nTPM: 142.8
Samples: 4
Max nTPM: 260.7
Min nTPM: 77.3
RHH5301_R3667
260.7
RHH5237_R3609
148.5
RHH5266_R3638
77.3
RHH5209_R3580
84.6
Terminal effector memory CD4 T-cell nTPM: 78.8
Samples: 2
Max nTPM: 103.1
Min nTPM: 54.5
RHH5243_R3615
54.5
RHH5272_R3644
103.1
Terminal effector memory CD8 T-cell nTPM: 148.4
Samples: 4
Max nTPM: 199.1
Min nTPM: 85.9
RHH5232_R3604
125.5
RHH5204_R3575
199.1
RHH5261_R3633
85.9
RHH5296_R3662
183.2
Vd2 gdTCR nTPM: 182.6
Samples: 4
Max nTPM: 275.6
Min nTPM: 99.9
RHH5234_R3606
143.4
RHH5206_R3577
211.3
RHH5263_R3635
99.9
RHH5298_R3664
275.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
