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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
158.7
nTPM
Monaco:
121.6
nTPM
Schmiedel:
232.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
158.7
HPA sample
nTPM
gdT-cell nTPM: 147.6
Samples: 6
Max nTPM: 160.6
Min nTPM: 128.3
P10809_1007
151.8
P10809_1022
142.0
P10809_1041
159.5
P10809_1060
128.3
P10809_1077
160.6
P10809_1098
143.1
MAIT T-cell nTPM: 150.3
Samples: 6
Max nTPM: 200.5
Min nTPM: 127.1
P10809_1006
127.1
P10809_1024
140.6
P10809_1043
148.1
P10809_1062
155.9
P10809_1083
200.5
P10809_1097
129.4
Memory CD4 T-cell nTPM: 143.5
Samples: 6
Max nTPM: 159.0
Min nTPM: 121.2
P10809_1014
121.2
P10809_1026
159.0
P10809_1045
146.6
P10809_1064
144.1
P10809_1086
147.1
P10809_1113
142.9
Memory CD8 T-cell nTPM: 139.8
Samples: 5
Max nTPM: 164.0
Min nTPM: 116.1
P10809_1012
116.1
P10809_1027
164.0
P10809_1046
158.2
P10809_1065
127.0
P10809_1111
133.8
Naive CD4 T-cell nTPM: 129.9
Samples: 6
Max nTPM: 144.5
Min nTPM: 115.9
P10809_1015
115.9
P10809_1030
144.5
P10809_1049
142.7
P10809_1068
123.7
P10809_1085
130.9
P10809_1112
121.7
Naive CD8 T-cell nTPM: 137.6
Samples: 6
Max nTPM: 159.7
Min nTPM: 118.6
P10809_1016
119.5
P10809_1031
159.7
P10809_1050
146.1
P10809_1069
136.1
P10809_1087
145.6
P10809_1110
118.6
T-reg nTPM: 158.7
Samples: 6
Max nTPM: 182.9
Min nTPM: 111.1
P10809_1018
111.1
P10809_1037
169.0
P10809_1056
165.3
P10809_1075
182.9
P10809_1094
180.9
P10809_1106
142.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
121.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 117.7
Samples: 4
Max nTPM: 131.1
Min nTPM: 103.8
RHH5202_R3573
103.8
RHH5230_R3602
127.0
RHH5259_R3631
131.1
RHH5288_R3660
108.9
Effector memory CD8 T-cell nTPM: 120.6
Samples: 4
Max nTPM: 148.1
Min nTPM: 96.5
RHH5203_R3574
96.5
RHH5231_R3603
118.3
RHH5260_R3632
148.1
RHH5289_R3661
119.5
MAIT T-cell nTPM: 113.8
Samples: 4
Max nTPM: 144.9
Min nTPM: 79.7
RHH5233_R3605
129.2
RHH5205_R3576
144.9
RHH5262_R3634
101.5
RHH5297_R3663
79.7
Memory CD4 T-cell TFH nTPM: 98.9
Samples: 4
Max nTPM: 126.7
Min nTPM: 76.8
RHH5300_R3666
76.8
RHH5236_R3608
81.5
RHH5265_R3637
110.5
RHH5208_R3579
126.7
Memory CD4 T-cell Th1 nTPM: 110.5
Samples: 4
Max nTPM: 144.5
Min nTPM: 82.4
RHH5210_R3581
109.4
RHH5302_R3668
82.4
RHH5238_R3610
144.5
RHH5267_R3639
105.5
Memory CD4 T-cell Th1/Th17 nTPM: 104.7
Samples: 4
Max nTPM: 126.4
Min nTPM: 76.6
RHH5303_R3669
76.6
RHH5211_R3582
92.3
RHH5239_R3611
126.4
RHH5268_R3640
123.3
Memory CD4 T-cell Th17 nTPM: 116.0
Samples: 4
Max nTPM: 140.7
Min nTPM: 91.3
RHH5304_R3670
91.3
RHH5212_R3583
119.7
RHH5240_R3612
140.7
RHH5269_R3641
112.4
Memory CD4 T-cell Th2 nTPM: 109.1
Samples: 4
Max nTPM: 128.1
Min nTPM: 92.5
RHH5305_R3671
92.5
RHH5213_R3584
108.3
RHH5241_R3613
128.1
RHH5270_R3642
107.3
Naive CD4 T-cell nTPM: 94.5
Samples: 4
Max nTPM: 114.2
Min nTPM: 74.9
RHH5306_R3672
74.9
RHH5214_R3585
76.1
RHH5242_R3614
112.6
RHH5271_R3643
114.2
Naive CD8 T-cell nTPM: 107.3
Samples: 4
Max nTPM: 136.7
Min nTPM: 82.1
RHH5201_R3572
109.4
RHH5229_R3601
136.7
RHH5258_R3630
82.1
RHH5287_R3659
101.0
Non-Vd2 gdTCR nTPM: 104.6
Samples: 4
Max nTPM: 124.7
Min nTPM: 83.4
RHH5235_R3607
124.7
RHH5264_R3636
113.0
RHH5207_R3578
97.3
RHH5299_R3665
83.4
T-reg nTPM: 85.9
Samples: 4
Max nTPM: 98.6
Min nTPM: 68.3
RHH5301_R3667
68.3
RHH5237_R3609
78.6
RHH5266_R3638
98.6
RHH5209_R3580
98.2
Terminal effector memory CD4 T-cell nTPM: 121.6
Samples: 2
Max nTPM: 130.1
Min nTPM: 113.0
RHH5243_R3615
130.1
RHH5272_R3644
113.0
Terminal effector memory CD8 T-cell nTPM: 110.8
Samples: 4
Max nTPM: 126.6
Min nTPM: 96.1
RHH5232_R3604
126.6
RHH5204_R3575
107.0
RHH5261_R3633
113.5
RHH5296_R3662
96.1
Vd2 gdTCR nTPM: 99.2
Samples: 4
Max nTPM: 116.6
Min nTPM: 69.8
RHH5234_R3606
101.2
RHH5206_R3577
109.3
RHH5263_R3635
116.6
RHH5298_R3664
69.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
