We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
338.1
nTPM
Monaco:
45.6
nTPM
Schmiedel:
149.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
338.1
HPA sample
nTPM
gdT-cell nTPM: 169.7
Samples: 6
Max nTPM: 231.1
Min nTPM: 129.9
P10809_1007
129.9
P10809_1022
162.3
P10809_1041
167.5
P10809_1060
160.4
P10809_1077
231.1
P10809_1098
166.9
MAIT T-cell nTPM: 165.6
Samples: 6
Max nTPM: 204.0
Min nTPM: 88.0
P10809_1006
88.0
P10809_1024
194.9
P10809_1043
151.6
P10809_1062
165.3
P10809_1083
189.7
P10809_1097
204.0
Memory CD4 T-cell nTPM: 238.5
Samples: 6
Max nTPM: 294.2
Min nTPM: 178.7
P10809_1014
178.7
P10809_1026
207.9
P10809_1045
207.7
P10809_1064
294.2
P10809_1086
281.8
P10809_1113
260.5
Memory CD8 T-cell nTPM: 207.3
Samples: 5
Max nTPM: 260.6
Min nTPM: 134.7
P10809_1012
134.7
P10809_1027
260.6
P10809_1046
186.7
P10809_1065
247.7
P10809_1111
207.0
Naive CD4 T-cell nTPM: 87.7
Samples: 6
Max nTPM: 99.8
Min nTPM: 63.3
P10809_1015
63.3
P10809_1030
91.0
P10809_1049
83.9
P10809_1068
88.8
P10809_1085
99.3
P10809_1112
99.8
Naive CD8 T-cell nTPM: 129.7
Samples: 6
Max nTPM: 223.3
Min nTPM: 58.6
P10809_1016
58.6
P10809_1031
92.4
P10809_1050
121.6
P10809_1069
192.1
P10809_1087
223.3
P10809_1110
90.4
T-reg nTPM: 338.1
Samples: 6
Max nTPM: 402.4
Min nTPM: 251.2
P10809_1018
251.2
P10809_1037
382.0
P10809_1056
282.4
P10809_1075
402.4
P10809_1094
377.7
P10809_1106
332.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
45.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 22.5
Samples: 4
Max nTPM: 34.3
Min nTPM: 14.1
RHH5202_R3573
14.1
RHH5230_R3602
21.5
RHH5259_R3631
34.3
RHH5288_R3660
19.9
Effector memory CD8 T-cell nTPM: 27.1
Samples: 4
Max nTPM: 40.0
Min nTPM: 21.6
RHH5203_R3574
25.3
RHH5231_R3603
21.6
RHH5260_R3632
40.0
RHH5289_R3661
21.6
MAIT T-cell nTPM: 29.5
Samples: 4
Max nTPM: 37.5
Min nTPM: 23.4
RHH5233_R3605
23.4
RHH5205_R3576
37.5
RHH5262_R3634
23.4
RHH5297_R3663
33.5
Memory CD4 T-cell TFH nTPM: 23.0
Samples: 4
Max nTPM: 38.9
Min nTPM: 15.9
RHH5300_R3666
15.9
RHH5236_R3608
38.9
RHH5265_R3637
20.4
RHH5208_R3579
16.7
Memory CD4 T-cell Th1 nTPM: 37.1
Samples: 4
Max nTPM: 63.1
Min nTPM: 15.2
RHH5210_R3581
15.2
RHH5302_R3668
30.9
RHH5238_R3610
63.1
RHH5267_R3639
39.3
Memory CD4 T-cell Th1/Th17 nTPM: 45.6
Samples: 4
Max nTPM: 52.4
Min nTPM: 33.8
RHH5303_R3669
49.4
RHH5211_R3582
33.8
RHH5239_R3611
46.9
RHH5268_R3640
52.4
Memory CD4 T-cell Th17 nTPM: 38.1
Samples: 4
Max nTPM: 40.0
Min nTPM: 36.1
RHH5304_R3670
36.1
RHH5212_R3583
39.9
RHH5240_R3612
36.5
RHH5269_R3641
40.0
Memory CD4 T-cell Th2 nTPM: 36.1
Samples: 4
Max nTPM: 49.9
Min nTPM: 30.0
RHH5305_R3671
31.1
RHH5213_R3584
30.0
RHH5241_R3613
33.5
RHH5270_R3642
49.9
Naive CD4 T-cell nTPM: 14.1
Samples: 4
Max nTPM: 20.3
Min nTPM: 9.1
RHH5306_R3672
13.0
RHH5214_R3585
20.3
RHH5242_R3614
9.1
RHH5271_R3643
13.8
Naive CD8 T-cell nTPM: 9.3
Samples: 4
Max nTPM: 14.2
Min nTPM: 3.1
RHH5201_R3572
11.7
RHH5229_R3601
14.2
RHH5258_R3630
3.1
RHH5287_R3659
8.0
Non-Vd2 gdTCR nTPM: 31.1
Samples: 4
Max nTPM: 35.9
Min nTPM: 26.4
RHH5235_R3607
35.3
RHH5264_R3636
26.4
RHH5207_R3578
26.6
RHH5299_R3665
35.9
T-reg nTPM: 30.8
Samples: 4
Max nTPM: 36.2
Min nTPM: 25.9
RHH5301_R3667
27.7
RHH5237_R3609
36.2
RHH5266_R3638
25.9
RHH5209_R3580
33.2
Terminal effector memory CD4 T-cell nTPM: 34.6
Samples: 2
Max nTPM: 40.0
Min nTPM: 29.2
RHH5243_R3615
40.0
RHH5272_R3644
29.2
Terminal effector memory CD8 T-cell nTPM: 43.6
Samples: 4
Max nTPM: 68.5
Min nTPM: 19.2
RHH5232_R3604
19.2
RHH5204_R3575
68.5
RHH5261_R3633
55.0
RHH5296_R3662
31.5
Vd2 gdTCR nTPM: 41.1
Samples: 4
Max nTPM: 67.7
Min nTPM: 24.8
RHH5234_R3606
24.8
RHH5206_R3577
67.7
RHH5263_R3635
38.1
RHH5298_R3664
33.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
