HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:41.3 nTPM
HPA Brain:31.0 nTPM
GTEx:41.3 nTPM
FANTOM5:48.3 Scaled Tags Per Million
Pig:2.2 nTPM
Mouse:9.0 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014861Antibody CAB080265Antibody CAB080267
Glial cells LowNot detectedNot detected
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.0
Sample id Sample description nTPM
Hippocampus
nTPM: 19.1
2529 Female, age 94, left hemisphere 26.7
1911 Female, age 85, right hemisphere 21.4
1898 Male, age 80, left hemisphere 20.8
2621 Female, age 67, right hemisphere 15.8
2148 Female, age 91, left hemisphere 15.2
1855 Male, age 76, left hemisphere 14.4
Dentate gyrus
nTPM: 23.4
2530 Female, age 94, left hemisphere 48.7
2528 Male, age 74, both hemispheres 28.1
2010 Male, age 76, both hemispheres 26.9
2531 Female, age 67, both hemispheres 12.7
1927 Female, age 91, both hemispheres 12.4
2246 Female, age 85, both hemispheres 11.3
Entorhinal gyrus
nTPM: 21.3
2117 Female, age 91, right hemisphere 44.0
2764 Male, age 80, right hemisphere 26.7
1787 Male, age 76, left hemisphere 17.3
1938 Female, age 85, left hemisphere 14.8
2613 Female, age 94, left hemisphere 14.2
2686 Male, age 75, right hemisphere 10.9
Hippocampus, CA1
nTPM: 13.9
2527 Male, age 74, both hemispheres 16.8
2082 Female, age 91, right hemisphere 16.2
2749 Male, age 80, left hemisphere 15.4
1873 Female, age 85, both hemispheres 14.4
2045 Male, age 76, both hemispheres 6.7
Hippocampus, CA2
nTPM: 22.5
1963 Male, age 80, left hemisphere 35.2
2437 Female, age 94, left hemisphere 24.6
2249 Male, age 74, both hemispheres 23.9
2113 Female, age 91, right hemisphere 20.1
1940 Female, age 85, left hemisphere 16.8
1892 Male, age 76, both hemispheres 14.4
Hippocampus, CA3
nTPM: 15.2
1891 Female, age 85, both hemispheres 29.1
1867 Male, age 76, both hemispheres 26.3
2436 Male, age 74, both hemispheres 16.3
2137 Male, age 80, left hemisphere 9.0
2620 Female, age 94, left hemisphere 6.8
2861 Female, age 67, both hemispheres 3.4
Parahippocampal cortex
nTPM: 15.6
2532 Female, age 72, left hemisphere 24.4
1990 Female, age 91, right hemisphere 22.4
2692 Male, age 74, both hemispheres 22.4
2018 Male, age 76, both hemispheres 18.1
1850 Male, age 80, both hemispheres 17.9
2245 Female, age 91, both hemispheres 15.6
1933 Female, age 85, both hemispheres 14.3
2693 Female, age 94, both hemispheres 9.6
2250 Female, age 67, right hemisphere 8.0
2622 Female, age 67, right hemisphere 3.6
Perirhinal gyrus
nTPM: 9.0
2521 Female, age 94, right hemisphere 11.7
2848 Male, age 76, right hemisphere 10.1
1794 Male, age 80, right hemisphere 8.7
1841 Female, age 85, right hemisphere 7.7
1847 Female, age 91, left hemisphere 6.9
Subiculum
nTPM: 31.0
2042 Male, age 76, both hemispheres 46.1
1901 Male, age 80, both hemispheres 34.9
2438 Female, age 94, left hemisphere 31.8
1977 Female, age 85, both hemispheres 29.3
2729 Female, age 91, right hemisphere 22.5
2619 Male, age 74, both hemispheres 21.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.3
Samples: 197

Max nTPM: 143.8
Min nTPM: 2.4
Std nTPM: 28.1
Median nTPM: 33.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 143.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 138.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 128.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 117.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 106.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 105.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 103.0
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 102.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 100.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 97.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 96.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.3
FF:10153-102I9 76 years, female 55.1
FF:10169-103B7 60 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.2
Pig sample Sample description nTPM
Subiculum
nTPM: 2.1
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.9
Sample A Female 1.9
Sample B Female 2.6
Sample C Male 2.0
Sample D Male 2.0
Dorsal hippocampus
nTPM: 2.2
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.6
Sample A Female 2.6
Sample B Female 1.9
Sample C Male 2.6
Sample D Male 1.6
Entorhinal cortex
nTPM: 2.0
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.5
Sample A Female 2.0
Sample B Female 2.3
Sample C Male 2.0
Sample D Male 1.5
Ventral hippocampus
nTPM: 2.2
Samples: 4

Max nTPM: 2.3
Min nTPM: 2.1
Sample A Female 2.1
Sample B Female 2.1
Sample C Male 2.3
Sample D Male 2.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 8.2
Min nTPM: 5.6
Sample A Male 7.9
Sample B Male 8.2
Sample C Female 7.5
Sample D Female 5.6
Hippocampal formation
nTPM: 9.0
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.1
Sample A Male 9.2
Sample B Male 8.1
Sample C Female 9.2
Sample D Female 9.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
75774629 Antisense, RP_060530_01_A06, Mouse strain C57BL/6J (56 days, male) 11.6
75773700 Antisense, RP_060530_01_A06, Mouse strain C57BL/6J (56 days, male) 11.1

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