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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
226.6
nTPM
Monaco:
183.5
nTPM
Schmiedel:
209.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
226.6
HPA sample
nTPM
gdT-cell nTPM: 128.6
Samples: 6
Max nTPM: 165.5
Min nTPM: 112.8
P10809_1007
112.8
P10809_1022
119.8
P10809_1041
165.5
P10809_1060
117.0
P10809_1077
118.6
P10809_1098
137.7
MAIT T-cell nTPM: 139.2
Samples: 6
Max nTPM: 169.3
Min nTPM: 103.7
P10809_1006
103.7
P10809_1024
169.3
P10809_1043
147.0
P10809_1062
129.4
P10809_1083
127.7
P10809_1097
158.1
Memory CD4 T-cell nTPM: 146.1
Samples: 6
Max nTPM: 164.7
Min nTPM: 130.6
P10809_1014
130.6
P10809_1026
164.7
P10809_1045
158.5
P10809_1064
141.8
P10809_1086
132.4
P10809_1113
148.7
Memory CD8 T-cell nTPM: 142.5
Samples: 5
Max nTPM: 163.4
Min nTPM: 117.6
P10809_1012
117.6
P10809_1027
163.4
P10809_1046
137.8
P10809_1065
142.8
P10809_1111
150.7
Naive CD4 T-cell nTPM: 138.7
Samples: 6
Max nTPM: 186.8
Min nTPM: 110.2
P10809_1015
110.2
P10809_1030
139.4
P10809_1049
186.8
P10809_1068
129.8
P10809_1085
131.2
P10809_1112
134.7
Naive CD8 T-cell nTPM: 136.3
Samples: 6
Max nTPM: 151.4
Min nTPM: 122.6
P10809_1016
122.6
P10809_1031
151.4
P10809_1050
150.2
P10809_1069
130.2
P10809_1087
123.8
P10809_1110
139.5
T-reg nTPM: 226.7
Samples: 6
Max nTPM: 297.9
Min nTPM: 181.1
P10809_1018
181.1
P10809_1037
217.1
P10809_1056
297.9
P10809_1075
195.5
P10809_1094
234.1
P10809_1106
234.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
183.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 135.6
Samples: 4
Max nTPM: 172.8
Min nTPM: 94.7
RHH5202_R3573
164.0
RHH5230_R3602
94.7
RHH5259_R3631
111.0
RHH5288_R3660
172.8
Effector memory CD8 T-cell nTPM: 132.7
Samples: 4
Max nTPM: 182.8
Min nTPM: 86.3
RHH5203_R3574
182.8
RHH5231_R3603
162.3
RHH5260_R3632
86.3
RHH5289_R3661
99.3
MAIT T-cell nTPM: 156.3
Samples: 4
Max nTPM: 212.1
Min nTPM: 112.9
RHH5233_R3605
167.8
RHH5205_R3576
112.9
RHH5262_R3634
132.2
RHH5297_R3663
212.1
Memory CD4 T-cell TFH nTPM: 174.2
Samples: 4
Max nTPM: 218.5
Min nTPM: 135.4
RHH5300_R3666
187.3
RHH5236_R3608
218.5
RHH5265_R3637
135.4
RHH5208_R3579
155.6
Memory CD4 T-cell Th1 nTPM: 164.4
Samples: 4
Max nTPM: 260.9
Min nTPM: 109.6
RHH5210_R3581
172.4
RHH5302_R3668
260.9
RHH5238_R3610
109.6
RHH5267_R3639
114.8
Memory CD4 T-cell Th1/Th17 nTPM: 148.6
Samples: 4
Max nTPM: 215.1
Min nTPM: 101.4
RHH5303_R3669
215.1
RHH5211_R3582
160.4
RHH5239_R3611
101.4
RHH5268_R3640
117.5
Memory CD4 T-cell Th17 nTPM: 120.7
Samples: 4
Max nTPM: 160.5
Min nTPM: 90.5
RHH5304_R3670
135.5
RHH5212_R3583
160.5
RHH5240_R3612
96.2
RHH5269_R3641
90.5
Memory CD4 T-cell Th2 nTPM: 159.3
Samples: 4
Max nTPM: 209.6
Min nTPM: 109.7
RHH5305_R3671
165.5
RHH5213_R3584
152.3
RHH5241_R3613
209.6
RHH5270_R3642
109.7
Naive CD4 T-cell nTPM: 143.6
Samples: 4
Max nTPM: 189.9
Min nTPM: 107.7
RHH5306_R3672
166.2
RHH5214_R3585
189.9
RHH5242_R3614
110.7
RHH5271_R3643
107.7
Naive CD8 T-cell nTPM: 125.6
Samples: 4
Max nTPM: 168.8
Min nTPM: 90.7
RHH5201_R3572
130.6
RHH5229_R3601
90.7
RHH5258_R3630
168.8
RHH5287_R3659
112.3
Non-Vd2 gdTCR nTPM: 142.1
Samples: 4
Max nTPM: 190.2
Min nTPM: 78.4
RHH5235_R3607
78.4
RHH5264_R3636
143.6
RHH5207_R3578
156.3
RHH5299_R3665
190.2
T-reg nTPM: 163.2
Samples: 4
Max nTPM: 218.1
Min nTPM: 118.7
RHH5301_R3667
218.1
RHH5237_R3609
183.6
RHH5266_R3638
118.7
RHH5209_R3580
132.2
Terminal effector memory CD4 T-cell nTPM: 124.2
Samples: 2
Max nTPM: 145.0
Min nTPM: 103.3
RHH5243_R3615
103.3
RHH5272_R3644
145.0
Terminal effector memory CD8 T-cell nTPM: 183.6
Samples: 4
Max nTPM: 292.3
Min nTPM: 119.6
RHH5232_R3604
142.8
RHH5204_R3575
292.3
RHH5261_R3633
119.6
RHH5296_R3662
179.5
Vd2 gdTCR nTPM: 183.1
Samples: 4
Max nTPM: 257.2
Min nTPM: 113.2
RHH5234_R3606
132.4
RHH5206_R3577
257.2
RHH5263_R3635
113.2
RHH5298_R3664
229.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
