HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:149.5 nTPM
HPA Brain:83.7 nTPM
GTEx:149.5 nTPM
FANTOM5:141.3 Scaled Tags Per Million
Pig:70.7 nTPM
Mouse:62.3 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063133Antibody HPA067561
Glial cells HighMedium
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.7
Sample id Sample description nTPM
Hippocampus
nTPM: 74.2
2529 Female, age 94, left hemisphere 84.4
2621 Female, age 67, right hemisphere 78.2
1855 Male, age 76, left hemisphere 77.1
1911 Female, age 85, right hemisphere 74.9
1898 Male, age 80, left hemisphere 69.8
2148 Female, age 91, left hemisphere 60.9
Dentate gyrus
nTPM: 83.7
2530 Female, age 94, left hemisphere 169.0
2010 Male, age 76, both hemispheres 102.0
2531 Female, age 67, both hemispheres 80.7
2246 Female, age 85, both hemispheres 63.9
2528 Male, age 74, both hemispheres 44.5
1927 Female, age 91, both hemispheres 42.2
Entorhinal gyrus
nTPM: 73.9
2686 Male, age 75, right hemisphere 115.6
2117 Female, age 91, right hemisphere 87.7
1787 Male, age 76, left hemisphere 64.5
2613 Female, age 94, left hemisphere 61.4
2764 Male, age 80, right hemisphere 58.2
1938 Female, age 85, left hemisphere 56.1
Hippocampus, CA1
nTPM: 57.7
1873 Female, age 85, both hemispheres 66.3
2045 Male, age 76, both hemispheres 62.7
2527 Male, age 74, both hemispheres 54.3
2082 Female, age 91, right hemisphere 53.3
2749 Male, age 80, left hemisphere 51.8
Hippocampus, CA2
nTPM: 65.2
2437 Female, age 94, left hemisphere 77.4
1940 Female, age 85, left hemisphere 69.2
1963 Male, age 80, left hemisphere 69.2
1892 Male, age 76, both hemispheres 64.1
2113 Female, age 91, right hemisphere 58.8
2249 Male, age 74, both hemispheres 52.6
Hippocampus, CA3
nTPM: 52.2
1891 Female, age 85, both hemispheres 74.2
1867 Male, age 76, both hemispheres 64.1
2861 Female, age 67, both hemispheres 62.7
2620 Female, age 94, left hemisphere 37.8
2436 Male, age 74, both hemispheres 37.5
2137 Male, age 80, left hemisphere 37.1
Parahippocampal cortex
nTPM: 60.6
2018 Male, age 76, both hemispheres 82.8
2532 Female, age 72, left hemisphere 77.6
2692 Male, age 74, both hemispheres 77.3
2245 Female, age 91, both hemispheres 70.9
2622 Female, age 67, right hemisphere 68.2
1990 Female, age 91, right hemisphere 53.2
1933 Female, age 85, both hemispheres 51.5
1850 Male, age 80, both hemispheres 47.9
2250 Female, age 67, right hemisphere 40.7
2693 Female, age 94, both hemispheres 35.9
Perirhinal gyrus
nTPM: 39.2
2848 Male, age 76, right hemisphere 53.9
1841 Female, age 85, right hemisphere 38.4
1794 Male, age 80, right hemisphere 36.3
1847 Female, age 91, left hemisphere 34.4
2521 Female, age 94, right hemisphere 32.9
Subiculum
nTPM: 83.2
2042 Male, age 76, both hemispheres 120.7
2438 Female, age 94, left hemisphere 107.0
1901 Male, age 80, both hemispheres 91.3
1977 Female, age 85, both hemispheres 66.5
2619 Male, age 74, both hemispheres 59.0
2729 Female, age 91, right hemisphere 54.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 149.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 149.5
Samples: 197

Max nTPM: 699.1
Min nTPM: 34.8
Std nTPM: 87.0
Median nTPM: 127.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 699.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 499.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 473.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 421.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 360.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 353.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 349.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 343.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 330.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 322.1
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 318.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 141.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.3
FF:10153-102I9 76 years, female 155.0
FF:10169-103B7 60 years, female 127.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.7
Pig sample Sample description nTPM
Subiculum
nTPM: 55.2
Samples: 4

Max nTPM: 61.9
Min nTPM: 47.4
Sample A Female 61.9
Sample B Female 61.1
Sample C Male 47.4
Sample D Male 50.4
Dorsal hippocampus
nTPM: 70.7
Samples: 4

Max nTPM: 94.2
Min nTPM: 45.5
Sample A Female 84.6
Sample B Female 58.4
Sample C Male 94.2
Sample D Male 45.5
Entorhinal cortex
nTPM: 46.5
Samples: 4

Max nTPM: 52.2
Min nTPM: 42.3
Sample A Female 44.6
Sample B Female 52.2
Sample C Male 46.9
Sample D Male 42.3
Ventral hippocampus
nTPM: 58.0
Samples: 4

Max nTPM: 60.4
Min nTPM: 55.5
Sample A Female 60.2
Sample B Female 55.5
Sample C Male 60.4
Sample D Male 56.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.7
Samples: 4

Max nTPM: 59.4
Min nTPM: 52.7
Sample A Male 58.4
Sample B Male 52.7
Sample C Female 59.4
Sample D Female 56.3
Hippocampal formation
nTPM: 62.4
Samples: 4

Max nTPM: 64.1
Min nTPM: 58.9
Sample A Male 64.0
Sample B Male 62.4
Sample C Female 64.1
Sample D Female 58.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71574416 Antisense, RP_050915_03_F09, Mouse strain C57BL/6J (56 days, male) 0.4

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