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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
162.9
nTPM
Monaco:
206.5
nTPM
Schmiedel:
426.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
162.9
HPA sample
nTPM
gdT-cell nTPM: 65.4
Samples: 6
Max nTPM: 76.2
Min nTPM: 53.1
P10809_1007
67.1
P10809_1022
68.9
P10809_1041
76.2
P10809_1060
61.9
P10809_1077
65.0
P10809_1098
53.1
MAIT T-cell nTPM: 89.5
Samples: 6
Max nTPM: 104.2
Min nTPM: 78.0
P10809_1006
104.2
P10809_1024
91.3
P10809_1043
78.0
P10809_1062
94.4
P10809_1083
90.0
P10809_1097
78.8
Memory CD4 T-cell nTPM: 122.9
Samples: 6
Max nTPM: 155.8
Min nTPM: 86.4
P10809_1014
135.2
P10809_1026
155.8
P10809_1045
136.6
P10809_1064
117.8
P10809_1086
86.4
P10809_1113
105.3
Memory CD8 T-cell nTPM: 92.8
Samples: 5
Max nTPM: 121.5
Min nTPM: 75.5
P10809_1012
100.9
P10809_1027
121.5
P10809_1046
75.5
P10809_1065
81.0
P10809_1111
85.0
Naive CD4 T-cell nTPM: 144.2
Samples: 6
Max nTPM: 170.4
Min nTPM: 115.4
P10809_1015
170.4
P10809_1030
152.8
P10809_1049
145.3
P10809_1068
154.7
P10809_1085
115.4
P10809_1112
126.8
Naive CD8 T-cell nTPM: 112.4
Samples: 6
Max nTPM: 159.6
Min nTPM: 67.1
P10809_1016
159.6
P10809_1031
132.9
P10809_1050
111.2
P10809_1069
99.4
P10809_1087
67.1
P10809_1110
104.3
T-reg nTPM: 162.9
Samples: 6
Max nTPM: 237.1
Min nTPM: 132.1
P10809_1018
155.6
P10809_1037
164.3
P10809_1056
237.1
P10809_1075
148.3
P10809_1094
140.2
P10809_1106
132.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
206.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 147.8
Samples: 4
Max nTPM: 174.6
Min nTPM: 94.1
RHH5202_R3573
164.9
RHH5230_R3602
157.4
RHH5259_R3631
94.1
RHH5288_R3660
174.6
Effector memory CD8 T-cell nTPM: 123.1
Samples: 4
Max nTPM: 172.2
Min nTPM: 88.0
RHH5203_R3574
172.2
RHH5231_R3603
133.6
RHH5260_R3632
88.0
RHH5289_R3661
98.5
MAIT T-cell nTPM: 132.2
Samples: 4
Max nTPM: 147.0
Min nTPM: 108.3
RHH5233_R3605
147.0
RHH5205_R3576
108.3
RHH5262_R3634
138.3
RHH5297_R3663
135.2
Memory CD4 T-cell TFH nTPM: 190.6
Samples: 4
Max nTPM: 228.3
Min nTPM: 152.2
RHH5300_R3666
172.4
RHH5236_R3608
152.2
RHH5265_R3637
209.5
RHH5208_R3579
228.3
Memory CD4 T-cell Th1 nTPM: 169.5
Samples: 4
Max nTPM: 223.1
Min nTPM: 126.8
RHH5210_R3581
179.0
RHH5302_R3668
223.1
RHH5238_R3610
126.8
RHH5267_R3639
149.2
Memory CD4 T-cell Th1/Th17 nTPM: 149.2
Samples: 4
Max nTPM: 201.5
Min nTPM: 102.0
RHH5303_R3669
164.9
RHH5211_R3582
201.5
RHH5239_R3611
102.0
RHH5268_R3640
128.2
Memory CD4 T-cell Th17 nTPM: 141.6
Samples: 4
Max nTPM: 198.7
Min nTPM: 118.0
RHH5304_R3670
131.3
RHH5212_R3583
198.7
RHH5240_R3612
118.0
RHH5269_R3641
118.5
Memory CD4 T-cell Th2 nTPM: 202.2
Samples: 4
Max nTPM: 241.3
Min nTPM: 163.1
RHH5305_R3671
198.3
RHH5213_R3584
206.0
RHH5241_R3613
241.3
RHH5270_R3642
163.1
Naive CD4 T-cell nTPM: 206.6
Samples: 4
Max nTPM: 223.2
Min nTPM: 189.6
RHH5306_R3672
218.3
RHH5214_R3585
189.6
RHH5242_R3614
223.2
RHH5271_R3643
195.1
Naive CD8 T-cell nTPM: 182.6
Samples: 4
Max nTPM: 229.5
Min nTPM: 100.7
RHH5201_R3572
183.5
RHH5229_R3601
100.7
RHH5258_R3630
229.5
RHH5287_R3659
216.7
Non-Vd2 gdTCR nTPM: 104.0
Samples: 4
Max nTPM: 120.0
Min nTPM: 88.5
RHH5235_R3607
88.5
RHH5264_R3636
110.8
RHH5207_R3578
120.0
RHH5299_R3665
96.7
T-reg nTPM: 160.5
Samples: 4
Max nTPM: 188.0
Min nTPM: 141.4
RHH5301_R3667
188.0
RHH5237_R3609
164.4
RHH5266_R3638
148.1
RHH5209_R3580
141.4
Terminal effector memory CD4 T-cell nTPM: 118.8
Samples: 2
Max nTPM: 139.7
Min nTPM: 97.8
RHH5243_R3615
97.8
RHH5272_R3644
139.7
Terminal effector memory CD8 T-cell nTPM: 100.8
Samples: 4
Max nTPM: 112.0
Min nTPM: 82.0
RHH5232_R3604
106.7
RHH5204_R3575
102.3
RHH5261_R3633
82.0
RHH5296_R3662
112.0
Vd2 gdTCR nTPM: 121.5
Samples: 4
Max nTPM: 132.8
Min nTPM: 94.1
RHH5234_R3606
132.8
RHH5206_R3577
130.1
RHH5263_R3635
94.1
RHH5298_R3664
129.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
