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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
77.5
nTPM
Monaco:
87.2
nTPM
Schmiedel:
80.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.5
HPA sample
nTPM
gdT-cell nTPM: 73.4
Samples: 6
Max nTPM: 88.3
Min nTPM: 34.8
P10809_1007
86.7
P10809_1022
73.9
P10809_1041
78.4
P10809_1060
34.8
P10809_1077
78.5
P10809_1098
88.3
MAIT T-cell nTPM: 71.8
Samples: 6
Max nTPM: 125.7
Min nTPM: 49.9
P10809_1006
61.2
P10809_1024
50.7
P10809_1043
69.5
P10809_1062
49.9
P10809_1083
73.6
P10809_1097
125.7
Memory CD4 T-cell nTPM: 43.4
Samples: 6
Max nTPM: 62.9
Min nTPM: 21.7
P10809_1014
40.5
P10809_1026
34.7
P10809_1045
56.3
P10809_1064
62.9
P10809_1086
44.5
P10809_1113
21.7
Memory CD8 T-cell nTPM: 77.5
Samples: 5
Max nTPM: 94.5
Min nTPM: 62.9
P10809_1012
62.9
P10809_1027
70.8
P10809_1046
94.5
P10809_1065
68.1
P10809_1111
91.1
Naive CD4 T-cell nTPM: 31.9
Samples: 6
Max nTPM: 50.1
Min nTPM: 22.9
P10809_1015
27.9
P10809_1030
28.6
P10809_1049
50.1
P10809_1068
22.9
P10809_1085
37.5
P10809_1112
24.1
Naive CD8 T-cell nTPM: 50.5
Samples: 6
Max nTPM: 60.5
Min nTPM: 33.3
P10809_1016
33.3
P10809_1031
49.6
P10809_1050
58.6
P10809_1069
60.5
P10809_1087
54.5
P10809_1110
46.5
T-reg nTPM: 54.9
Samples: 6
Max nTPM: 94.1
Min nTPM: 28.5
P10809_1018
32.2
P10809_1037
58.7
P10809_1056
94.1
P10809_1075
53.9
P10809_1094
28.5
P10809_1106
62.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.4
Samples: 4
Max nTPM: 43.1
Min nTPM: 15.3
RHH5202_R3573
15.3
RHH5230_R3602
35.8
RHH5259_R3631
31.4
RHH5288_R3660
43.1
Effector memory CD8 T-cell nTPM: 53.2
Samples: 4
Max nTPM: 80.4
Min nTPM: 27.7
RHH5203_R3574
45.8
RHH5231_R3603
80.4
RHH5260_R3632
58.9
RHH5289_R3661
27.7
MAIT T-cell nTPM: 57.2
Samples: 4
Max nTPM: 76.7
Min nTPM: 38.3
RHH5233_R3605
38.3
RHH5205_R3576
39.1
RHH5262_R3634
74.8
RHH5297_R3663
76.7
Memory CD4 T-cell TFH nTPM: 38.7
Samples: 4
Max nTPM: 55.5
Min nTPM: 20.5
RHH5300_R3666
41.9
RHH5236_R3608
55.5
RHH5265_R3637
36.8
RHH5208_R3579
20.5
Memory CD4 T-cell Th1 nTPM: 39.9
Samples: 4
Max nTPM: 51.7
Min nTPM: 23.2
RHH5210_R3581
39.8
RHH5302_R3668
51.7
RHH5238_R3610
23.2
RHH5267_R3639
45.0
Memory CD4 T-cell Th1/Th17 nTPM: 40.8
Samples: 4
Max nTPM: 75.1
Min nTPM: 16.3
RHH5303_R3669
23.3
RHH5211_R3582
75.1
RHH5239_R3611
16.3
RHH5268_R3640
48.3
Memory CD4 T-cell Th17 nTPM: 39.2
Samples: 4
Max nTPM: 84.6
Min nTPM: 19.5
RHH5304_R3670
20.1
RHH5212_R3583
84.6
RHH5240_R3612
19.5
RHH5269_R3641
32.5
Memory CD4 T-cell Th2 nTPM: 33.0
Samples: 4
Max nTPM: 43.0
Min nTPM: 15.2
RHH5305_R3671
43.0
RHH5213_R3584
36.8
RHH5241_R3613
15.2
RHH5270_R3642
37.1
Naive CD4 T-cell nTPM: 34.9
Samples: 4
Max nTPM: 53.7
Min nTPM: 19.0
RHH5306_R3672
38.6
RHH5214_R3585
53.7
RHH5242_R3614
28.3
RHH5271_R3643
19.0
Naive CD8 T-cell nTPM: 21.5
Samples: 4
Max nTPM: 39.5
Min nTPM: 9.7
RHH5201_R3572
9.7
RHH5229_R3601
19.1
RHH5258_R3630
39.5
RHH5287_R3659
17.7
Non-Vd2 gdTCR nTPM: 87.1
Samples: 4
Max nTPM: 173.8
Min nTPM: 35.5
RHH5235_R3607
75.0
RHH5264_R3636
64.2
RHH5207_R3578
35.5
RHH5299_R3665
173.8
T-reg nTPM: 48.4
Samples: 4
Max nTPM: 65.1
Min nTPM: 29.8
RHH5301_R3667
63.6
RHH5237_R3609
65.1
RHH5266_R3638
29.8
RHH5209_R3580
35.2
Terminal effector memory CD4 T-cell nTPM: 65.3
Samples: 2
Max nTPM: 74.2
Min nTPM: 56.4
RHH5243_R3615
74.2
RHH5272_R3644
56.4
Terminal effector memory CD8 T-cell nTPM: 82.6
Samples: 4
Max nTPM: 142.4
Min nTPM: 51.4
RHH5232_R3604
74.3
RHH5204_R3575
142.4
RHH5261_R3633
62.3
RHH5296_R3662
51.4
Vd2 gdTCR nTPM: 84.8
Samples: 4
Max nTPM: 132.4
Min nTPM: 43.6
RHH5234_R3606
64.4
RHH5206_R3577
98.7
RHH5263_R3635
43.6
RHH5298_R3664
132.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
