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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
93.3
nTPM
Monaco:
205.9
nTPM
Schmiedel:
68.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.3
HPA sample
nTPM
gdT-cell nTPM: 89.6
Samples: 6
Max nTPM: 111.3
Min nTPM: 65.6
P10809_1007
71.5
P10809_1022
108.1
P10809_1041
111.3
P10809_1060
65.6
P10809_1077
92.9
P10809_1098
88.3
MAIT T-cell nTPM: 93.3
Samples: 6
Max nTPM: 100.9
Min nTPM: 85.3
P10809_1006
87.7
P10809_1024
85.3
P10809_1043
100.9
P10809_1062
97.6
P10809_1083
87.4
P10809_1097
100.8
Memory CD4 T-cell nTPM: 59.7
Samples: 6
Max nTPM: 72.0
Min nTPM: 52.0
P10809_1014
57.1
P10809_1026
52.0
P10809_1045
72.0
P10809_1064
54.1
P10809_1086
69.8
P10809_1113
53.1
Memory CD8 T-cell nTPM: 74.0
Samples: 5
Max nTPM: 103.5
Min nTPM: 51.7
P10809_1012
65.5
P10809_1027
51.7
P10809_1046
103.5
P10809_1065
74.3
P10809_1111
75.0
Naive CD4 T-cell nTPM: 41.2
Samples: 6
Max nTPM: 49.1
Min nTPM: 35.4
P10809_1015
39.5
P10809_1030
35.4
P10809_1049
38.3
P10809_1068
49.1
P10809_1085
44.2
P10809_1112
40.4
Naive CD8 T-cell nTPM: 64.3
Samples: 6
Max nTPM: 88.2
Min nTPM: 41.2
P10809_1016
41.2
P10809_1031
61.4
P10809_1050
59.5
P10809_1069
86.8
P10809_1087
88.2
P10809_1110
48.4
T-reg nTPM: 80.2
Samples: 6
Max nTPM: 99.4
Min nTPM: 66.4
P10809_1018
66.4
P10809_1037
87.8
P10809_1056
99.4
P10809_1075
78.5
P10809_1094
73.7
P10809_1106
75.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
205.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 127.7
Samples: 4
Max nTPM: 148.4
Min nTPM: 116.2
RHH5202_R3573
120.8
RHH5230_R3602
125.4
RHH5259_R3631
148.4
RHH5288_R3660
116.2
Effector memory CD8 T-cell nTPM: 172.1
Samples: 4
Max nTPM: 205.7
Min nTPM: 156.5
RHH5203_R3574
165.4
RHH5231_R3603
160.6
RHH5260_R3632
156.5
RHH5289_R3661
205.7
MAIT T-cell nTPM: 205.9
Samples: 4
Max nTPM: 247.0
Min nTPM: 180.3
RHH5233_R3605
210.9
RHH5205_R3576
247.0
RHH5262_R3634
185.3
RHH5297_R3663
180.3
Memory CD4 T-cell TFH nTPM: 112.9
Samples: 4
Max nTPM: 126.1
Min nTPM: 99.7
RHH5300_R3666
99.7
RHH5236_R3608
122.9
RHH5265_R3637
103.0
RHH5208_R3579
126.1
Memory CD4 T-cell Th1 nTPM: 109.6
Samples: 4
Max nTPM: 125.6
Min nTPM: 96.6
RHH5210_R3581
96.6
RHH5302_R3668
125.6
RHH5238_R3610
109.4
RHH5267_R3639
106.9
Memory CD4 T-cell Th1/Th17 nTPM: 150.0
Samples: 4
Max nTPM: 172.3
Min nTPM: 132.3
RHH5303_R3669
172.3
RHH5211_R3582
159.0
RHH5239_R3611
136.3
RHH5268_R3640
132.3
Memory CD4 T-cell Th17 nTPM: 131.8
Samples: 4
Max nTPM: 153.2
Min nTPM: 113.0
RHH5304_R3670
128.0
RHH5212_R3583
113.0
RHH5240_R3612
132.8
RHH5269_R3641
153.2
Memory CD4 T-cell Th2 nTPM: 112.1
Samples: 4
Max nTPM: 143.8
Min nTPM: 90.6
RHH5305_R3671
99.5
RHH5213_R3584
143.8
RHH5241_R3613
114.4
RHH5270_R3642
90.6
Naive CD4 T-cell nTPM: 93.4
Samples: 4
Max nTPM: 115.0
Min nTPM: 78.9
RHH5306_R3672
79.2
RHH5214_R3585
78.9
RHH5242_R3614
115.0
RHH5271_R3643
100.5
Naive CD8 T-cell nTPM: 107.4
Samples: 4
Max nTPM: 125.3
Min nTPM: 89.7
RHH5201_R3572
106.6
RHH5229_R3601
125.3
RHH5258_R3630
107.9
RHH5287_R3659
89.7
Non-Vd2 gdTCR nTPM: 204.9
Samples: 4
Max nTPM: 235.9
Min nTPM: 162.0
RHH5235_R3607
199.5
RHH5264_R3636
162.0
RHH5207_R3578
222.2
RHH5299_R3665
235.9
T-reg nTPM: 118.7
Samples: 4
Max nTPM: 128.9
Min nTPM: 109.6
RHH5301_R3667
109.6
RHH5237_R3609
117.1
RHH5266_R3638
119.0
RHH5209_R3580
128.9
Terminal effector memory CD4 T-cell nTPM: 179.5
Samples: 2
Max nTPM: 194.9
Min nTPM: 164.0
RHH5243_R3615
194.9
RHH5272_R3644
164.0
Terminal effector memory CD8 T-cell nTPM: 204.3
Samples: 4
Max nTPM: 225.2
Min nTPM: 182.0
RHH5232_R3604
210.6
RHH5204_R3575
199.4
RHH5261_R3633
182.0
RHH5296_R3662
225.2
Vd2 gdTCR nTPM: 185.6
Samples: 4
Max nTPM: 193.8
Min nTPM: 175.8
RHH5234_R3606
186.5
RHH5206_R3577
186.1
RHH5263_R3635
193.8
RHH5298_R3664
175.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
