We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
86.8
nTPM
FANTOM5:
67.8
Scaled Tags Per Million
Pig:
45.0
nTPM
Allen mouse:
3.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
86.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 77.1
2090
Male, age 80, both hemispheres
96.4
2188
Female, age 91, both hemispheres
75.0
2301
Female, age 85, both hemispheres
74.8
1984
Male, age 76, both hemispheres
62.3
Dorsal cochlear nucleus nTPM: 86.3
2378
Male, age 80, both hemispheres
98.8
2370
Male, age 61, both hemispheres
94.6
2802
Male, age 74, right hemisphere
87.4
2187
Female, age 91, both hemispheres
76.2
2058
Male, age 76, both hemispheres
74.6
Dorsal tegmental nucleus nTPM: 80.6
2358
Male, age 61, both hemispheres
103.2
2083
Male, age 80, both hemispheres
76.9
2326
Male, age 74, both hemispheres
73.8
1936
Male, age 76, left hemisphere
68.4
Dorsolateral tegmental area nTPM: 80.6
2337
Male, age 61, both hemispheres
129.2
2654
Male, age 80, both hemispheres
81.7
2751
Female, age 85, both hemispheres
70.4
2360
Male, age 74, both hemispheres
63.5
2141
Male, age 76, both hemispheres
57.9
Kolliker-Fuse nucleus nTPM: 83.6
2315
Male, age 76, right hemisphere
99.6
2163
Male, age 80, both hemispheres
78.7
2793
Female, age 91, left hemisphere
72.6
Lateral lemniscal nuclei nTPM: 61.7
2746
Female, age 85, left hemisphere
70.5
2320
Female, age 91, left hemisphere
65.4
2453
Male, age 74, right hemisphere
61.7
2169
Male, age 76, both hemispheres
58.3
2036
Male, age 80, both hemispheres
52.7
Lateral parabrachial nucleus nTPM: 79.8
2792
Male, age 76, both hemispheres
93.3
2013
Male, age 80, both hemispheres
79.9
2790
Male, age 61, both hemispheres
77.7
2139
Female, age 85, right hemisphere
68.1
Lateral vestibular nucleus nTPM: 86.8
2311
Male, age 80, both hemispheres
88.2
2184
Male, age 76, both hemispheres
85.4
Locus coeruleus nTPM: 64.2
1980
Male, age 76, both hemispheres
73.9
2123
Female, age 91, both hemispheres
68.7
2162
Male, age 80, both hemispheres
68.4
2317
Female, age 72, unknown
68.3
2014
Male, age 55, unknown
59.7
2720
Male, age 74, both hemispheres
59.1
2788
Male, age 74, unknown
51.4
Medial parabrachial nucleus nTPM: 73.4
2156
Male, age 61, both hemispheres
78.5
2786
Male, age 76, both hemispheres
74.4
2463
Female, age 85, right hemisphere
72.6
2854
Male, age 80, both hemispheres
70.9
2170
Female, age 91, both hemispheres
70.6
Medial periolivary nuclei nTPM: 67.4
2081
Male, age 80, both hemispheres
90.8
2458
Female, age 91, both hemispheres
68.4
2063
Male, age 76, both hemispheres
65.4
2791
Male, age 74, right hemisphere
57.9
2171
Female, age 85, both hemispheres
54.3
Motor facial nucleus nTPM: 66.1
2126
Male, age 61, both hemispheres
82.7
2795
Female, age 91, both hemispheres
75.4
2697
Female, age 85, both hemispheres
64.3
2365
Male, age 74, right hemisphere
62.7
2062
Male, age 76, both hemispheres
59.2
2327
Male, age 80, both hemispheres
52.5
Motor trigeminal nucleus nTPM: 73.5
2335
Male, age 61, both hemispheres
88.3
2560
Male, age 74, both hemispheres
73.7
2321
Female, age 91, both hemispheres
73.2
2309
Male, age 76, both hemispheres
67.2
2079
Male, age 80, both hemispheres
65.1
Nuclei of the trapezoid body nTPM: 59.9
2368
Female, age 91, both hemispheres
68.5
2166
Male, age 80, both hemispheres
65.7
1983
Male, age 76, both hemispheres
60.7
2735
Female, age 85, both hemispheres
53.3
2159
Male, age 61, both hemispheres
51.4
Nucleus raphe magnus nTPM: 60.8
2051
Male, age 76, both hemispheres
79.2
2459
Female, age 91, both hemispheres
67.7
2328
Male, age 80, both hemispheres
62.1
2455
Male, age 74, both hemispheres
54.9
2160
Male, age 61, both hemispheres
51.9
2172
Female, age 85, both hemispheres
49.2
Paramedian reticular nucleus nTPM: 68.2
2313
Male, age 61, both hemispheres
73.1
2057
Male, age 80, both hemispheres
72.7
2052
Male, age 76, both hemispheres
71.0
2050
Female, age 85, both hemispheres
56.1
Pedunculopontine tegmental nucleus nTPM: 72.0
2338
Male, age 61, both hemispheres
92.7
2334
Male, age 80, both hemispheres
70.9
1921
Female, age 85, both hemispheres
52.5
Pontine nuclei nTPM: 65.8
2115
Male, age 80, left hemisphere
89.1
2319
Female, age 91, both hemispheres
70.2
2109
Female, age 72, unknown
68.6
1968
Male, age 76, left hemisphere
64.7
1863
Male, age 55, unknown
59.8
2454
Male, age 74, left hemisphere
59.1
2787
Female, age 85, both hemispheres
58.6
2727
Male, age 61, right hemisphere
56.4
Pontine raphe nucleus nTPM: 58.2
2853
Male, age 76, midline
60.4
2122
Female, age 85, midline
55.9
Posteroventral cochlear nucleus nTPM: 81.9
2341
Male, age 80, both hemispheres
93.5
2371
Male, age 61, both hemispheres
93.5
2135
Female, age 91, both hemispheres
82.1
2070
Male, age 76, both hemispheres
76.8
2752
Female, age 85, both hemispheres
63.4
Principal sensory trigeminal nucleus nTPM: 65.6
2324
Male, age 76, both hemispheres
82.8
2367
Female, age 91, left hemisphere
68.2
2158
Male, age 61, both hemispheres
55.9
2008
Male, age 80, left hemisphere
55.4
Reticular pontine nucleus, caudal nTPM: 70.3
2457
Female, age 91, both hemispheres
75.1
2559
Male, age 74, both hemispheres
74.7
2092
Male, age 76, both hemispheres
72.4
2332
Male, age 80, right hemisphere
59.2
Reticular pontine nucleus, oral nTPM: 64.6
2167
Male, age 76, both hemispheres
70.1
1939
Male, age 80, both hemispheres
69.4
2361
Male, age 74, both hemispheres
62.8
2366
Female, age 91, both hemispheres
62.5
2012
Female, age 85, both hemispheres
58.1
Reticulotegmental nucleus nTPM: 72.8
2452
Male, age 74, both hemispheres
82.4
2333
Male, age 80, both hemispheres
79.3
2322
Female, age 91, both hemispheres
72.8
2325
Male, age 76, both hemispheres
56.5
Spinal trigeminal nucleus, oral nTPM: 72.3
2164
Male, age 80, both hemispheres
87.0
1978
Male, age 76, both hemispheres
66.3
2737
Female, age 85, both hemispheres
63.7
Subcoeruleus area nTPM: 67.8
2451
Male, age 74, both hemispheres
81.3
2369
Female, age 85, left hemisphere
74.9
2089
Male, age 76, left hemisphere
65.2
2323
Female, age 91, left hemisphere
59.3
1958
Male, age 80, both hemispheres
58.3
Superior olive nTPM: 64.4
2020
Male, age 76, both hemispheres
76.4
2561
Female, age 91, both hemispheres
71.4
2329
Male, age 80, right hemisphere
63.9
2364
Male, age 74, right hemisphere
61.0
1875
Female, age 85, both hemispheres
49.4
Ventral periolivary nuclei nTPM: 61.2
2023
Male, age 76, both hemispheres
71.4
2794
Female, age 91, left hemisphere
63.0
2165
Male, age 80, both hemispheres
58.1
2130
Female, age 85, both hemispheres
52.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 72.9
2359
Male, age 61, both hemispheres
85.4
2161
Male, age 80, both hemispheres
79.9
2456
Female, age 91, both hemispheres
78.0
2840
Female, age 85, both hemispheres
68.1
1959
Male, age 76, both hemispheres
65.9
2449
Male, age 74, both hemispheres
60.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
45.0
Pig sample
Sample description
nTPM
Pons nTPM: 45.0
Samples: 4
Max nTPM: 48.5
Min nTPM: 41.2
Sample A
Female
48.5
Sample B
Female
41.2
Sample C
Male
44.6
Sample D
Male
45.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
