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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
354.3
nTPM
Monaco:
218.0
nTPM
Schmiedel:
181.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
354.3
HPA sample
nTPM
gdT-cell nTPM: 119.1
Samples: 6
Max nTPM: 177.3
Min nTPM: 78.4
P10809_1007
127.9
P10809_1022
177.3
P10809_1041
106.0
P10809_1060
79.9
P10809_1077
78.4
P10809_1098
145.3
MAIT T-cell nTPM: 203.6
Samples: 6
Max nTPM: 218.9
Min nTPM: 188.1
P10809_1006
192.3
P10809_1024
216.2
P10809_1043
188.1
P10809_1062
198.1
P10809_1083
207.8
P10809_1097
218.9
Memory CD4 T-cell nTPM: 250.7
Samples: 6
Max nTPM: 311.7
Min nTPM: 229.9
P10809_1014
246.7
P10809_1026
311.7
P10809_1045
235.1
P10809_1064
247.4
P10809_1086
229.9
P10809_1113
233.2
Memory CD8 T-cell nTPM: 223.7
Samples: 5
Max nTPM: 238.8
Min nTPM: 193.0
P10809_1012
235.7
P10809_1027
193.0
P10809_1046
232.8
P10809_1065
218.4
P10809_1111
238.8
Naive CD4 T-cell nTPM: 171.4
Samples: 6
Max nTPM: 185.9
Min nTPM: 151.4
P10809_1015
151.4
P10809_1030
167.3
P10809_1049
178.5
P10809_1068
170.0
P10809_1085
175.4
P10809_1112
185.9
Naive CD8 T-cell nTPM: 170.3
Samples: 6
Max nTPM: 213.7
Min nTPM: 145.1
P10809_1016
158.7
P10809_1031
169.5
P10809_1050
145.1
P10809_1069
180.9
P10809_1087
213.7
P10809_1110
153.6
T-reg nTPM: 354.3
Samples: 6
Max nTPM: 448.6
Min nTPM: 307.1
P10809_1018
307.1
P10809_1037
321.9
P10809_1056
448.6
P10809_1075
319.3
P10809_1094
412.2
P10809_1106
316.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
218.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 174.4
Samples: 4
Max nTPM: 283.7
Min nTPM: 118.6
RHH5202_R3573
169.3
RHH5230_R3602
125.8
RHH5259_R3631
118.6
RHH5288_R3660
283.7
Effector memory CD8 T-cell nTPM: 181.3
Samples: 4
Max nTPM: 243.2
Min nTPM: 116.5
RHH5203_R3574
200.9
RHH5231_R3603
243.2
RHH5260_R3632
116.5
RHH5289_R3661
164.7
MAIT T-cell nTPM: 154.0
Samples: 4
Max nTPM: 192.5
Min nTPM: 120.9
RHH5233_R3605
192.5
RHH5205_R3576
120.9
RHH5262_R3634
141.7
RHH5297_R3663
160.7
Memory CD4 T-cell TFH nTPM: 212.7
Samples: 4
Max nTPM: 250.6
Min nTPM: 148.1
RHH5300_R3666
250.0
RHH5236_R3608
250.6
RHH5265_R3637
202.0
RHH5208_R3579
148.1
Memory CD4 T-cell Th1 nTPM: 174.2
Samples: 4
Max nTPM: 275.0
Min nTPM: 114.5
RHH5210_R3581
168.6
RHH5302_R3668
275.0
RHH5238_R3610
114.5
RHH5267_R3639
138.5
Memory CD4 T-cell Th1/Th17 nTPM: 218.0
Samples: 4
Max nTPM: 381.5
Min nTPM: 82.4
RHH5303_R3669
381.5
RHH5211_R3582
250.4
RHH5239_R3611
82.4
RHH5268_R3640
157.5
Memory CD4 T-cell Th17 nTPM: 165.1
Samples: 4
Max nTPM: 219.9
Min nTPM: 131.5
RHH5304_R3670
176.2
RHH5212_R3583
219.9
RHH5240_R3612
131.5
RHH5269_R3641
132.8
Memory CD4 T-cell Th2 nTPM: 203.1
Samples: 4
Max nTPM: 250.8
Min nTPM: 161.1
RHH5305_R3671
250.8
RHH5213_R3584
161.1
RHH5241_R3613
205.2
RHH5270_R3642
195.3
Naive CD4 T-cell nTPM: 124.9
Samples: 4
Max nTPM: 155.5
Min nTPM: 88.5
RHH5306_R3672
154.5
RHH5214_R3585
155.5
RHH5242_R3614
88.5
RHH5271_R3643
100.9
Naive CD8 T-cell nTPM: 97.7
Samples: 4
Max nTPM: 152.7
Min nTPM: 36.2
RHH5201_R3572
100.8
RHH5229_R3601
36.2
RHH5258_R3630
152.7
RHH5287_R3659
101.1
Non-Vd2 gdTCR nTPM: 18.8
Samples: 4
Max nTPM: 21.6
Min nTPM: 11.9
RHH5235_R3607
20.3
RHH5264_R3636
21.6
RHH5207_R3578
21.5
RHH5299_R3665
11.9
T-reg nTPM: 202.8
Samples: 4
Max nTPM: 285.8
Min nTPM: 132.6
RHH5301_R3667
252.4
RHH5237_R3609
285.8
RHH5266_R3638
132.6
RHH5209_R3580
140.3
Terminal effector memory CD4 T-cell nTPM: 136.3
Samples: 2
Max nTPM: 218.7
Min nTPM: 53.8
RHH5243_R3615
53.8
RHH5272_R3644
218.7
Terminal effector memory CD8 T-cell nTPM: 148.5
Samples: 4
Max nTPM: 274.7
Min nTPM: 47.4
RHH5232_R3604
156.3
RHH5204_R3575
115.4
RHH5261_R3633
47.4
RHH5296_R3662
274.7
Vd2 gdTCR nTPM: 160.1
Samples: 4
Max nTPM: 208.0
Min nTPM: 105.2
RHH5234_R3606
151.3
RHH5206_R3577
208.0
RHH5263_R3635
105.2
RHH5298_R3664
175.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
