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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
179.6
nTPM
Monaco:
114.7
nTPM
Schmiedel:
48.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
179.6
HPA sample
nTPM
gdT-cell nTPM: 100.2
Samples: 6
Max nTPM: 122.7
Min nTPM: 68.2
P10809_1007
68.2
P10809_1022
115.4
P10809_1041
122.7
P10809_1060
94.3
P10809_1077
96.7
P10809_1098
103.7
MAIT T-cell nTPM: 92.3
Samples: 6
Max nTPM: 125.8
Min nTPM: 53.5
P10809_1006
53.5
P10809_1024
89.2
P10809_1043
119.7
P10809_1062
84.1
P10809_1083
81.5
P10809_1097
125.8
Memory CD4 T-cell nTPM: 106.3
Samples: 6
Max nTPM: 125.6
Min nTPM: 59.5
P10809_1014
59.5
P10809_1026
115.3
P10809_1045
125.6
P10809_1064
122.0
P10809_1086
114.1
P10809_1113
101.3
Memory CD8 T-cell nTPM: 106.8
Samples: 5
Max nTPM: 135.5
Min nTPM: 63.5
P10809_1012
63.5
P10809_1027
105.2
P10809_1046
125.7
P10809_1065
135.5
P10809_1111
104.3
Naive CD4 T-cell nTPM: 83.9
Samples: 6
Max nTPM: 153.5
Min nTPM: 41.1
P10809_1015
41.1
P10809_1030
74.5
P10809_1049
153.5
P10809_1068
84.0
P10809_1085
70.3
P10809_1112
80.2
Naive CD8 T-cell nTPM: 99.2
Samples: 6
Max nTPM: 130.3
Min nTPM: 54.6
P10809_1016
54.6
P10809_1031
103.4
P10809_1050
106.2
P10809_1069
130.3
P10809_1087
110.9
P10809_1110
89.6
T-reg nTPM: 179.6
Samples: 6
Max nTPM: 293.5
Min nTPM: 95.0
P10809_1018
95.0
P10809_1037
175.3
P10809_1056
293.5
P10809_1075
173.1
P10809_1094
149.1
P10809_1106
191.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 54.3
Samples: 4
Max nTPM: 74.3
Min nTPM: 43.9
RHH5202_R3573
52.6
RHH5230_R3602
46.2
RHH5259_R3631
43.9
RHH5288_R3660
74.3
Effector memory CD8 T-cell nTPM: 60.7
Samples: 4
Max nTPM: 81.2
Min nTPM: 38.8
RHH5203_R3574
81.2
RHH5231_R3603
74.8
RHH5260_R3632
48.1
RHH5289_R3661
38.8
MAIT T-cell nTPM: 53.9
Samples: 4
Max nTPM: 57.0
Min nTPM: 48.6
RHH5233_R3605
53.5
RHH5205_R3576
57.0
RHH5262_R3634
48.6
RHH5297_R3663
56.6
Memory CD4 T-cell TFH nTPM: 58.9
Samples: 4
Max nTPM: 79.7
Min nTPM: 34.7
RHH5300_R3666
79.7
RHH5236_R3608
73.3
RHH5265_R3637
34.7
RHH5208_R3579
47.7
Memory CD4 T-cell Th1 nTPM: 77.5
Samples: 4
Max nTPM: 118.0
Min nTPM: 56.3
RHH5210_R3581
65.8
RHH5302_R3668
118.0
RHH5238_R3610
69.7
RHH5267_R3639
56.3
Memory CD4 T-cell Th1/Th17 nTPM: 67.6
Samples: 4
Max nTPM: 102.1
Min nTPM: 54.5
RHH5303_R3669
102.1
RHH5211_R3582
58.4
RHH5239_R3611
55.5
RHH5268_R3640
54.5
Memory CD4 T-cell Th17 nTPM: 52.0
Samples: 4
Max nTPM: 54.9
Min nTPM: 49.0
RHH5304_R3670
49.7
RHH5212_R3583
49.0
RHH5240_R3612
54.2
RHH5269_R3641
54.9
Memory CD4 T-cell Th2 nTPM: 62.2
Samples: 4
Max nTPM: 72.3
Min nTPM: 55.9
RHH5305_R3671
72.3
RHH5213_R3584
57.0
RHH5241_R3613
63.4
RHH5270_R3642
55.9
Naive CD4 T-cell nTPM: 54.7
Samples: 4
Max nTPM: 88.1
Min nTPM: 27.0
RHH5306_R3672
65.8
RHH5214_R3585
88.1
RHH5242_R3614
37.9
RHH5271_R3643
27.0
Naive CD8 T-cell nTPM: 54.7
Samples: 4
Max nTPM: 70.1
Min nTPM: 36.3
RHH5201_R3572
36.3
RHH5229_R3601
58.9
RHH5258_R3630
70.1
RHH5287_R3659
53.5
Non-Vd2 gdTCR nTPM: 86.4
Samples: 4
Max nTPM: 138.5
Min nTPM: 54.1
RHH5235_R3607
58.2
RHH5264_R3636
54.1
RHH5207_R3578
94.9
RHH5299_R3665
138.5
T-reg nTPM: 77.1
Samples: 4
Max nTPM: 100.3
Min nTPM: 54.6
RHH5301_R3667
100.3
RHH5237_R3609
93.4
RHH5266_R3638
54.6
RHH5209_R3580
60.2
Terminal effector memory CD4 T-cell nTPM: 71.7
Samples: 2
Max nTPM: 83.2
Min nTPM: 60.2
RHH5243_R3615
60.2
RHH5272_R3644
83.2
Terminal effector memory CD8 T-cell nTPM: 114.7
Samples: 4
Max nTPM: 200.8
Min nTPM: 75.0
RHH5232_R3604
87.2
RHH5204_R3575
200.8
RHH5261_R3633
75.0
RHH5296_R3662
95.9
Vd2 gdTCR nTPM: 98.3
Samples: 4
Max nTPM: 126.3
Min nTPM: 57.4
RHH5234_R3606
88.8
RHH5206_R3577
126.3
RHH5263_R3635
57.4
RHH5298_R3664
120.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
