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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
107.6
nTPM
Monaco:
16.0
nTPM
Schmiedel:
22.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.6
HPA sample
nTPM
gdT-cell nTPM: 69.1
Samples: 6
Max nTPM: 82.1
Min nTPM: 58.1
P10809_1007
69.6
P10809_1022
82.1
P10809_1041
80.3
P10809_1060
58.1
P10809_1077
62.8
P10809_1098
61.4
MAIT T-cell nTPM: 62.5
Samples: 6
Max nTPM: 84.7
Min nTPM: 49.8
P10809_1006
52.8
P10809_1024
60.3
P10809_1043
84.7
P10809_1062
65.7
P10809_1083
61.8
P10809_1097
49.8
Memory CD4 T-cell nTPM: 74.0
Samples: 6
Max nTPM: 92.6
Min nTPM: 61.5
P10809_1014
64.9
P10809_1026
92.6
P10809_1045
80.2
P10809_1064
71.1
P10809_1086
61.5
P10809_1113
73.6
Memory CD8 T-cell nTPM: 69.8
Samples: 5
Max nTPM: 88.5
Min nTPM: 52.9
P10809_1012
52.9
P10809_1027
88.5
P10809_1046
80.4
P10809_1065
62.9
P10809_1111
64.4
Naive CD4 T-cell nTPM: 56.6
Samples: 6
Max nTPM: 76.1
Min nTPM: 41.8
P10809_1015
48.9
P10809_1030
60.6
P10809_1049
76.1
P10809_1068
57.5
P10809_1085
41.8
P10809_1112
54.9
Naive CD8 T-cell nTPM: 58.8
Samples: 6
Max nTPM: 74.2
Min nTPM: 50.1
P10809_1016
54.9
P10809_1031
57.1
P10809_1050
56.6
P10809_1069
74.2
P10809_1087
59.9
P10809_1110
50.1
T-reg nTPM: 107.6
Samples: 6
Max nTPM: 158.3
Min nTPM: 85.4
P10809_1018
85.4
P10809_1037
119.0
P10809_1056
158.3
P10809_1075
96.3
P10809_1094
96.9
P10809_1106
89.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.8
Samples: 4
Max nTPM: 15.6
Min nTPM: 5.4
RHH5202_R3573
5.4
RHH5230_R3602
8.4
RHH5259_R3631
15.6
RHH5288_R3660
13.7
Effector memory CD8 T-cell nTPM: 8.9
Samples: 4
Max nTPM: 15.9
Min nTPM: 5.7
RHH5203_R3574
5.7
RHH5231_R3603
7.8
RHH5260_R3632
15.9
RHH5289_R3661
6.0
MAIT T-cell nTPM: 10.0
Samples: 4
Max nTPM: 14.7
Min nTPM: 7.7
RHH5233_R3605
8.9
RHH5205_R3576
14.7
RHH5262_R3634
7.7
RHH5297_R3663
8.5
Memory CD4 T-cell TFH nTPM: 7.9
Samples: 4
Max nTPM: 15.7
Min nTPM: 2.4
RHH5300_R3666
10.8
RHH5236_R3608
15.7
RHH5265_R3637
2.7
RHH5208_R3579
2.4
Memory CD4 T-cell Th1 nTPM: 11.9
Samples: 4
Max nTPM: 19.2
Min nTPM: 3.8
RHH5210_R3581
3.8
RHH5302_R3668
12.4
RHH5238_R3610
19.2
RHH5267_R3639
12.1
Memory CD4 T-cell Th1/Th17 nTPM: 8.7
Samples: 4
Max nTPM: 12.6
Min nTPM: 3.0
RHH5303_R3669
7.3
RHH5211_R3582
3.0
RHH5239_R3611
12.6
RHH5268_R3640
12.0
Memory CD4 T-cell Th17 nTPM: 12.3
Samples: 4
Max nTPM: 18.6
Min nTPM: 8.6
RHH5304_R3670
18.6
RHH5212_R3583
10.4
RHH5240_R3612
11.6
RHH5269_R3641
8.6
Memory CD4 T-cell Th2 nTPM: 11.9
Samples: 4
Max nTPM: 17.7
Min nTPM: 7.3
RHH5305_R3671
17.7
RHH5213_R3584
7.3
RHH5241_R3613
14.0
RHH5270_R3642
8.6
Naive CD4 T-cell nTPM: 12.1
Samples: 4
Max nTPM: 15.4
Min nTPM: 6.2
RHH5306_R3672
15.4
RHH5214_R3585
15.3
RHH5242_R3614
6.2
RHH5271_R3643
11.4
Naive CD8 T-cell nTPM: 9.5
Samples: 4
Max nTPM: 12.6
Min nTPM: 1.6
RHH5201_R3572
1.6
RHH5229_R3601
12.4
RHH5258_R3630
11.4
RHH5287_R3659
12.6
Non-Vd2 gdTCR nTPM: 7.7
Samples: 4
Max nTPM: 9.3
Min nTPM: 6.3
RHH5235_R3607
6.3
RHH5264_R3636
7.6
RHH5207_R3578
7.5
RHH5299_R3665
9.3
T-reg nTPM: 13.7
Samples: 4
Max nTPM: 21.2
Min nTPM: 9.9
RHH5301_R3667
21.2
RHH5237_R3609
9.9
RHH5266_R3638
12.0
RHH5209_R3580
11.8
Terminal effector memory CD4 T-cell nTPM: 9.4
Samples: 2
Max nTPM: 11.2
Min nTPM: 7.6
RHH5243_R3615
11.2
RHH5272_R3644
7.6
Terminal effector memory CD8 T-cell nTPM: 14.5
Samples: 4
Max nTPM: 25.2
Min nTPM: 3.7
RHH5232_R3604
3.7
RHH5204_R3575
25.2
RHH5261_R3633
17.7
RHH5296_R3662
11.4
Vd2 gdTCR nTPM: 16.0
Samples: 4
Max nTPM: 22.4
Min nTPM: 12.0
RHH5234_R3606
12.0
RHH5206_R3577
22.4
RHH5263_R3635
14.8
RHH5298_R3664
14.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
