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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
123.3
nTPM
Monaco:
174.5
nTPM
Schmiedel:
179.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.3
HPA sample
nTPM
gdT-cell nTPM: 112.3
Samples: 6
Max nTPM: 154.6
Min nTPM: 72.2
P10809_1007
72.2
P10809_1022
113.1
P10809_1041
154.6
P10809_1060
98.9
P10809_1077
111.4
P10809_1098
123.5
MAIT T-cell nTPM: 108.5
Samples: 6
Max nTPM: 131.0
Min nTPM: 72.1
P10809_1006
72.1
P10809_1024
118.4
P10809_1043
131.0
P10809_1062
104.9
P10809_1083
94.7
P10809_1097
130.0
Memory CD4 T-cell nTPM: 98.9
Samples: 6
Max nTPM: 128.9
Min nTPM: 66.1
P10809_1014
66.1
P10809_1026
116.3
P10809_1045
128.9
P10809_1064
89.2
P10809_1086
83.8
P10809_1113
108.8
Memory CD8 T-cell nTPM: 123.3
Samples: 5
Max nTPM: 153.5
Min nTPM: 90.3
P10809_1012
100.6
P10809_1027
124.5
P10809_1046
153.5
P10809_1065
90.3
P10809_1111
147.7
Naive CD4 T-cell nTPM: 109.4
Samples: 6
Max nTPM: 149.8
Min nTPM: 72.2
P10809_1015
72.2
P10809_1030
116.0
P10809_1049
149.8
P10809_1068
105.3
P10809_1085
98.1
P10809_1112
114.8
Naive CD8 T-cell nTPM: 112.5
Samples: 6
Max nTPM: 150.6
Min nTPM: 86.6
P10809_1016
97.1
P10809_1031
120.0
P10809_1050
123.6
P10809_1069
97.2
P10809_1087
86.6
P10809_1110
150.6
T-reg nTPM: 100.3
Samples: 6
Max nTPM: 147.7
Min nTPM: 61.6
P10809_1018
69.6
P10809_1037
98.5
P10809_1056
147.7
P10809_1075
123.4
P10809_1094
61.6
P10809_1106
100.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
174.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.8
Samples: 4
Max nTPM: 171.2
Min nTPM: 112.6
RHH5202_R3573
171.2
RHH5230_R3602
141.2
RHH5259_R3631
112.6
RHH5288_R3660
162.0
Effector memory CD8 T-cell nTPM: 154.2
Samples: 4
Max nTPM: 175.0
Min nTPM: 113.7
RHH5203_R3574
156.7
RHH5231_R3603
175.0
RHH5260_R3632
113.7
RHH5289_R3661
171.4
MAIT T-cell nTPM: 156.6
Samples: 4
Max nTPM: 189.3
Min nTPM: 91.6
RHH5233_R3605
189.3
RHH5205_R3576
91.6
RHH5262_R3634
166.8
RHH5297_R3663
178.7
Memory CD4 T-cell TFH nTPM: 162.6
Samples: 4
Max nTPM: 174.2
Min nTPM: 149.1
RHH5300_R3666
153.3
RHH5236_R3608
173.7
RHH5265_R3637
149.1
RHH5208_R3579
174.2
Memory CD4 T-cell Th1 nTPM: 133.4
Samples: 4
Max nTPM: 156.5
Min nTPM: 108.3
RHH5210_R3581
153.3
RHH5302_R3668
156.5
RHH5238_R3610
108.3
RHH5267_R3639
115.4
Memory CD4 T-cell Th1/Th17 nTPM: 127.6
Samples: 4
Max nTPM: 184.2
Min nTPM: 88.9
RHH5303_R3669
184.2
RHH5211_R3582
131.8
RHH5239_R3611
88.9
RHH5268_R3640
105.3
Memory CD4 T-cell Th17 nTPM: 114.0
Samples: 4
Max nTPM: 128.4
Min nTPM: 90.9
RHH5304_R3670
127.5
RHH5212_R3583
128.4
RHH5240_R3612
109.0
RHH5269_R3641
90.9
Memory CD4 T-cell Th2 nTPM: 152.0
Samples: 4
Max nTPM: 168.6
Min nTPM: 142.8
RHH5305_R3671
153.2
RHH5213_R3584
143.4
RHH5241_R3613
168.6
RHH5270_R3642
142.8
Naive CD4 T-cell nTPM: 158.2
Samples: 4
Max nTPM: 189.9
Min nTPM: 116.5
RHH5306_R3672
167.4
RHH5214_R3585
189.9
RHH5242_R3614
159.0
RHH5271_R3643
116.5
Naive CD8 T-cell nTPM: 174.5
Samples: 4
Max nTPM: 218.5
Min nTPM: 118.7
RHH5201_R3572
218.5
RHH5229_R3601
118.7
RHH5258_R3630
193.4
RHH5287_R3659
167.4
Non-Vd2 gdTCR nTPM: 152.8
Samples: 4
Max nTPM: 197.0
Min nTPM: 115.3
RHH5235_R3607
115.3
RHH5264_R3636
197.0
RHH5207_R3578
131.9
RHH5299_R3665
166.9
T-reg nTPM: 139.9
Samples: 4
Max nTPM: 171.5
Min nTPM: 104.0
RHH5301_R3667
169.2
RHH5237_R3609
171.5
RHH5266_R3638
104.0
RHH5209_R3580
114.7
Terminal effector memory CD4 T-cell nTPM: 137.5
Samples: 2
Max nTPM: 158.1
Min nTPM: 116.8
RHH5243_R3615
116.8
RHH5272_R3644
158.1
Terminal effector memory CD8 T-cell nTPM: 158.6
Samples: 4
Max nTPM: 194.2
Min nTPM: 97.1
RHH5232_R3604
194.2
RHH5204_R3575
161.6
RHH5261_R3633
97.1
RHH5296_R3662
181.4
Vd2 gdTCR nTPM: 169.1
Samples: 4
Max nTPM: 195.7
Min nTPM: 138.3
RHH5234_R3606
179.4
RHH5206_R3577
163.1
RHH5263_R3635
138.3
RHH5298_R3664
195.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
